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GT23353

CSHL Arabidopsis genetrap mutant lines

Original: GT23353

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23353

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3564544 [Map]; Strand: w
      • AT3G11380.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23353 - 5-prime edge 
    TCTTTGAGAG CATCCCGGAG AATATGAGAT TCGAGTCAAC GTACAATTCT 
    CTATTAAGAA GTTACGCAAG ACAATCCGGG GAAAAAGCTC TGAAGAAAGC 
    CGAATCTATT TTCAAGAAGA TGAAGAAGCT AGGGTTGCTC TTGAGACCTT 
    CACCGTACAA CTCGATGACA TCACTCTATA GCTCTCTCGG AAACAGAGAT 
    AAAGTCAATG AGATTCTTCG AGAGATGAAG GAGAACAACG TTGAGCTCGA 
    TAATGTCACC GTGAACAACG CTTTGCGAGT ATACGCTGCT GTATCTGATG 
    TAGCGACAAT GGACAAGTTT CTAGCTGATA GGAAAGAGAT TACAAGGCTT 
    GATGGGCTCA CAATGCTTGC GATGGCAAAG GCTTATGTGA GAGACGGTTC 
    TAAACAAAAG GCTAGGAGGA TGCTTCAAGA AACAGAGGAA TGGTTGGGTC 
    ATGACTATAA GGAACTCATG AGCCTATATG GTGAAGCAGG AGAGATAGAA 
    GATGTTCACC GTGTATAGGA CAAGTACAAG GCGACAAGAC AGAAGGATAA 
    TGAAGAATTT CGAACTTTGA TTGGTTCTCT CTTGAAGCTT GGTGATACCA 
    AAGGAGCAGA GAAGATATAC TACAATGAGT GTGAGTGCTC CGGTCTTGAG 
    TTTGATAACC GAATCCCCGA TATGTTGGTG TCGGGTTATC GCGAAAAGGG 
    AATGGTGATG AAGGCAGATA AACTGGTGAA CAAGACTTTG TGGATCAGAG 
    GATTGGCTAC ACCAATCACT CTGTTGCTGG AAGAAATGGA TAAAAAGGGG 
    AATAAAGTGA GTCCGTCGGG CTTGAGAGAC CTCATCAAGA ATCTA

AT3G11380.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 4044 Blast hits to 2539 proteins in 107 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2; Plants - 3964; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Link
InterPro Scan - TAIR