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GT23370

CSHL Arabidopsis genetrap mutant lines

Original: GT23370

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23370

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22228398 [Map]; Strand: w
      • AT3G60160.1 - [+] show detail - multidrug resistance-associated protein 9
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23370 - 5-prime edge
    TTTCTCCCTG CTTGTATCCA GGGAGACAAA GGGTTGATCC ATGAGAAAGT 
    GATGCGTTGC CCTTAGAGTA GCGTTTCCAT ATGGGGAAGA AGAAGAATAA
    GACTCTTTCT TGTTCTGCTC TGTTTGGTCA CCAAGTAGTA ATGGCTCTGT
    GTTACCGCTG GATTCAAGAA GATGAAAACC GGTTTTGCCT CTGATTGAAA
    CAGCCAACAG GAACAAGGAT GCAAGAAGAC CAGTCAAGTC GGCATAATCT
    TGAAACCCGA GAGGCTCGTG TTTCGCGGTA ATGAAATGAG CATCAAAGGA
    AAAGGATAAG ATGAAACTAC AGAGTCACCA TGACCTTAAC ATCTAAGGAA
    ACTTGACAAG CCTCCTTTCT CTGATCTTCA CC

AT3G60160.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 9
Curator Summary
member of MRP subfamily
Computational Description
multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink).
Link
InterPro Scan - TAIR