1. Home
  2. Mutant Lines
  3. GT23379

GT23379

CSHL Arabidopsis genetrap mutant lines

Original: GT23379

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23379

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3329606 [Map]; Strand: c
      • AT1G10160.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT23379 - 5-prime edge 
    CTTGTGCCAC ATGAGTTTCC AAAAAACATC CCACAAGAAG ATTATTAGAA 
    GCAATCCAGC TTCGCACAAC TCGTTGACGA TTACGGCTAT TTAAGCCTCT 
    AATATTCCAA CAAAAGACCT TCATATTCAC AACAAAAGGT GAAGGTGAAA 
    GCAAAGCTTT CAATGAGAAG AAGGACCGTC ACCGGCCCTG CCATCGACGA 
    AACCTTGAAG CTCTGTCACG GGGGGACGAA TACGGTTGTG CCACTTCTTA 
    AGTTCTTTCT TTTTTGCCTT AGTAGACATC ACTGCCCAGC CCAGGGGAAG 
    AGGGAAGTTT GGATCCGGAT CTTTGATAGA CTCTCTCATA GATTTTTTAG 
    GGAGAGTAGG AGGTGGAGAA ATTCCAGAAT CTGCACCAAT GATAACAGTA 
    GGAACTGGCG AATTCAAACC TGGTCTCACA ACCCATTTCT

AT1G10160.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 3.9e-39 P-value blast match to GB:AAA67727 reverse transcriptase (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR