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GT23402

CSHL Arabidopsis genetrap mutant lines

Original: GT23402

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23402

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3750240 [Map]; Strand: c
      • AT3G11870.1 - [+] show detail - Endoribonuclease/protein kinase IRE1-like
        Distance: -1147; Region: intergenic
      • AT3G11880.1 - [+] show detail - Protein of unknown function DUF2359, transmembrane
        Distance: -1420; Region: intergenic
    Flanking Genome Sequence: GT23402 - 5-prime edge 
    TTTCTCTCTG TCGGACTAGC TTTTAATTAG AGAGTATTCA GTACAACACC 
    ACATATTTTT GTCACATAAT TAGAAACTTT TTTGAATAAA AATAATAATT 
    AACTTTAAAA AATATCAATT ATCAGAAATA TGTAGTCCGG AATATATCAT 
    TTTATAAAAC TAGTATAAAA TATATCAATT ATCAAAAATA TCAATTAGTA 
    AAGATATGTA ACTTCTAAAT TAAAAAATAT TTATCAATCT CCTAATAAGT 
    ATTAACAATT AGCAAATTAG AGTATTAAAA GAAACCCATT TTGACACTAG 
    TATAAATAAT TTTACACAAC CAACAAAAAT GGCCCTATCT GCCACCTCAT 
    TATCTCCTGG TGTTTTCATG AACGTCTTCG TTTCACTCTG TCAGATTAGC 
    AAAAGAAAAT TCTAAATCGT TGCATATACA CTTCCATCAG CAAAAAAGCT 
    TTAGAGACTC CCAAGTGTTT TACTTAAACG TTTTGATTTC ACTCTTACTC 
    AGATTAACAA AAGAAAATTC TAAATCGTTG CACATACACG TCCATCAGCA 
    AAAAAGCTTT AGAGACTCCC AAGTGTTTTT ACTTAAACGT CTTGATTTCA 
    CTCTTACTCA GATTAGCAAA AGAAAATTCT AAATCGTTGC ACATACACAT 
    CATGACACGT CCATCACCCA ATCAGCAAAA AA

AT3G11870.1

Model type
Protein coding
Short Description
Endoribonuclease/protein kinase IRE1-like
Computational Description
Endoribonuclease/protein kinase IRE1-like; FUNCTIONS IN: endoribonuclease activity, producing 5'-phosphomonoesters, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, mRNA processing; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), KEN domain, ribonuclease activator (InterPro:IPR010513), PUG domain (InterPro:IPR006567), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Endoribonuclease/protein kinase IRE1-like (TAIR:AT2G17520.1); Has 43296 Blast hits to 42939 proteins in 2046 species: Archae - 74; Bacteria - 4886; Metazoa - 17147; Fungi - 4251; Plants - 8096; Viruses - 78; Other Eukaryotes - 8764 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11880.1

Model type
Protein coding
Short Description
Protein of unknown function DUF2359, transmembrane
Computational Description
Protein of unknown function DUF2359, transmembrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G70770.2); Has 155 Blast hits to 134 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR