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GT23409

CSHL Arabidopsis genetrap mutant lines

Original: GT23409

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23409

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2429593 [Map]; Strand: w
      • AT1G07870.2 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: intron5 (CDS)
      • AT1G07860.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protei...
        Distance: -162; Region: promoter
    Flanking Genome Sequence: GT23409 - 5-prime edge 
    AGGTTTTGGT TATTTAACGG CAAAAATCTT AACGGGTTCA CGCGGGATAA 
    GTTGCATCAC GTGATCATAG TCCTATTTCT ATTACATATT TACGACTTTT 
    GCCATTCATC ATTATGAATT TTTATACATT ACTTAATCCT AATTTACCAG 
    ACTTTTTGAT CGGGAAAATA TATATATGAC CAACGATATT TGTTTTTGTT 
    CAATATATGT ATATATGTCC CAAAACAAAA TGGTTTTTTT TTTTTTTTTT 
    TTTTCAAAAA AAAAAAATTT TTTTTAAAAA AAAACCCAAG CCAAAATTTT 
    CCCCCCCAAA AAAGGTTAAA AAGGGCCCGG GGGGGGTTTT TATTTTTTCC 
    CCCATTTTTG GGGGAACCCA AAAAAAAATT TTTTTTTTTT CCCCCCCCTT 
    TTGGGGAACC CAAAGGGGGC CCTTTCATTT TTTTTTTTTT GGGAGGGGGG 
    GGGTTTT

AT1G07860.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G07870.2); Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07870.2

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G28590.1).
Link
InterPro Scan - TAIR