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GT23435

CSHL Arabidopsis genetrap mutant lines

Original: GT23435

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23435

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1957443 [Map]; Strand: c
      • AT3G06430.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23435 - 5-prime edge 
    TTCTCCCTTG TGTGGATGCT TCTCAGTTTG ACTTGGTGGA TTCGTTATAC 
    AAGGAAATGG CCCTTTGAGT GATAACTCCA AACACTGTGA CCCAGAACAT 
    ACCCTTAAGT GGGTACGGTA GGGTCGGAAG GTTTGATCAG ATGGAGAAAG 
    TTTTGTCTGA TATGTTGGTG AGTACTGCTT GCAAACCCGA CGTGGGGACT 
    ATGAATATCA TCCTTAGTGT GTTTGCA

AT3G06430.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
embryo defective 2750 (EMB2750); INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53170.1); Has 31867 Blast hits to 12007 proteins in 283 species: Archae - 3; Bacteria - 31; Metazoa - 288; Fungi - 376; Plants - 30037; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink).
Link
InterPro Scan - TAIR