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GT23456

CSHL Arabidopsis genetrap mutant lines

Original: GT23456

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23456

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 476037 [Map]; Strand: c
      • AT2G02010.1 - [+] show detail - glutamate decarboxylase 4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23456 - 5-prime edge 
    ATGGAGCCAG AATGTGACAA GCTCATGATG GAGTCCATCA ACAAGAACTA 
    CGTCGACATG GACGAGTACC CTGTCACCAC TGAGCTTCAG AACCGATGTG 
    TTAACATGAT AGCACGTCTC TTCAACGCGC CGCTTGGTGA CGGTGAAGCT 
    GCCGTTGGTG TTGGCACCGT GGGATCGTCG GAGGCGATTA TGTTGGCCGG 
    TTTGGCTTTT AAGAGACAAT GGCAGAATAA GCGTAAGGCC CAAGGGCTTC 
    CTTATGATAA GCCCAATATC GTAACCGGTG CTAATGTCCA GGTAAACCAA 
    AACAAAAATT GATGAAATAT TAACCAAGAC AAAATTGAAT TTATCAATCC 
    GGTTAAGTTA TATGTGTGAC TCAATTTCCG GTTCAATACA GGTTTGCTGG 
    GAGAAATTCG CAAGGTATTT CGAAGTGGAG CTTAAGGAAG TGAACCTAAG 
    AGAAGACTAT TACGTGATGG ACCCTGTAAA GGCGGTCGAA ATGGTAGACG 
    AAAACACAAT TTGTGTCGCT GCCATCCTCG GTTCAACGTT AACCGGTGAA 
    TTCGAAGACG TTAAGCTCCT CAACGACCTC CTTGTCGAGA AAAACAAGCA 
    AACCGGGTAA TTAAACCAAA CCGAGAAACA AGCTAATATC GATTGTAACC 
    GGTTTGGAGT CCGGTTTTAA CGTTCTAAAA CACAATTTGT AGATGGGACA 
    CGCCAATACA

AT2G02010.1

Model type
Protein coding
Short Description
glutamate decarboxylase 4
Computational Description
glutamate decarboxylase 4 (GAD4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 3 (TAIR:AT2G02000.1); Has 2849 Blast hits to 2845 proteins in 876 species: Archae - 190; Bacteria - 1701; Metazoa - 147; Fungi - 354; Plants - 286; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink).
Link
InterPro Scan - TAIR