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GT23459

CSHL Arabidopsis genetrap mutant lines

Original: GT23459

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23459

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3513667 [Map]; Strand: w
      • AT3G11210.1 - [+] show detail - SGNH hydrolase-type esterase superfamily protein
        Distance: -607; Region: promoter
      • AT3G11220.1 - [+] show detail - Paxneb protein-related
        Distance: 0; Region: exon9 (3UTR)
      • AT3G11220.2 - [+] show detail - Paxneb protein-related
        Distance: 0; Region: exon10 (3UTR)
    Flanking Genome Sequence: GT23459 - 5-prime edge 
    GTGATTACAT CGAACTAGCA TCTATCATTG GTCATAGTTT CATAAGAGTG 
    TATACAATAC AGAAATGAAA TAAATTTCAT TATAAAAACA TATTGCTTTT 
    TTTTTTCCGG AACCTAGGGC CAAAACCGGT TTTAAAAACC AAAAACCCAA 
    AAAGGACCGG AGGAAATTAA AAAACCCCAG GGGAAGGGAA AAAAAACCAA 
    AAAAAAAAAA AAAAAAAACA ACCCCCCCAC CCCAAAACCC AGGGGCCCCG 
    AATTGGAAGA ACCCCCCCCC AAAGGGCCCA AAAAAGGTCC CCCGGACCCC 
    CCCACCGGGG CCTGGTTCCA AACCCCCAAA ACCCAAAAAC CTCCCCTCCT 
    CCAGCCCCTT GGAAAGGTTT TTGCCCCCAA AATTACCGGG CCCCGGTCCC 
    TTAAACAATT CCAAAAAAAC CCGGGGTTTA AGACCCAAAG GAACCCCTTT 
    TTTCCACGGG TTCCAAACCA ATTCCTCCCC CCC

AT3G11210.1

Model type
Protein coding
Short Description
SGNH hydrolase-type esterase superfamily protein
Computational Description
SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G38180.1); Has 768 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 304; Metazoa - 76; Fungi - 152; Plants - 166; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11220.1

Model type
Protein coding
Short Description
Paxneb protein-related
Curator Summary
A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1
Computational Description
ELONGATA 1 (ELO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell proliferation, organ growth; LOCATED IN: Elongator holoenzyme complex; CONTAINS InterPro DOMAIN/s: Elongator complex protein 4 (InterPro:IPR008728); Has 319 Blast hits to 294 proteins in 144 species: Archae - 2; Bacteria - 2; Metazoa - 142; Fungi - 99; Plants - 52; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11220.2

Model type
Protein coding
Short Description
Paxneb protein-related
Curator Summary
A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1
Computational Description
ELONGATA 1 (ELO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell proliferation, organ growth; LOCATED IN: Elongator holoenzyme complex; CONTAINS InterPro DOMAIN/s: Elongator complex protein 4 (InterPro:IPR008728); Has 305 Blast hits to 280 proteins in 134 species: Archae - 2; Bacteria - 2; Metazoa - 144; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR