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GT23471

CSHL Arabidopsis genetrap mutant lines

Original: GT23471

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23471

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13201079 [Map]; Strand: c
      • AT4G26005.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: -678; Region: promoter
      • AT4G26010.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23471 - 5-prime edge 
    CCAGCTAATG CGACCGAGTC TCTTGTGGCA AGAGTTACAA TGTCTGCGCA 
    TGAGACAGTT CGGGGACATG CAGCCTCGAG CTGTCTCTTA GCCTCATCAA 
    TGATCTCGTA GCCTCTCACG CTTGCATTTG GTCCAGTGCT TTTCTCTGAT 
    GGCCTTCCAG GTCTTGGGTC GATCAAGAGG GAAGCATCAC AACCCTACAC 
    AACCATTCAA AACATTGCTT GATCAATGTG TTGTCTAAAT ATTAGCTAGT 
    TTATGTTAAT ATATATACAC ATGTACACAC AGGAGAAGCT TACGGACCCT 
    GACAAAGCAA TCATGAAACT GCATACGAAG AAATGCTGCA GTAATGGACT 
    TGTCACTTCT GAAACGGTTG GCAACAACAC TAGCCACGAT AGATTCGGCA 
    CGGGGGCATG AGCGGCTGTA GAACCCAGTT CGGAGCTGCG CCAAAGCAGA 
    AGGAGCAAGG AAACAGAAAA GGAAAAACAA AGCTGTGATT GACCTCATTT 
    CGTATGATGA GCTCTCCCTT CCCTCTCCTG TGAATGATAC TTGCAAGTTT 
    TGTGATGAAA TTCTAAGCCC CCGTAAATGC ATATTTATAT GTAGTTTTGG 
    GGATAAGACA TTGGCAAAGT AGAGAATGTT TCA

AT4G26005.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G26010.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G34510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR