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GT23472

CSHL Arabidopsis genetrap mutant lines

Original: GT23472

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23472

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1975799 [Map]; Strand: w
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: -45; Region: promoter
      • AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
        Distance: -45; Region: promoter
    Flanking Genome Sequence: GT23472 - 5-prime edge
    GCAGCTGAAG CAGAGTCTGA GCATCTTGTT GCTATAGGAA ACGACGTTGT 
    TTTATATAAC AACGAAACGA TGTCAGTTAT TTACAATGAA AACGATGTCG
    TTTTAACTTT TTTGTATTGC TTTGTTTTGT ACTCTTGGAC TACTAACTAG
    GACTCTAATA ATTTTTTTTG TCCATTTTTT TGTACTTGGA GATCAAAATC
    ATTTCAAATT TTCCTGAAAT AAACAAATTC TCCGAGAGAT AATCTTCTTT
    TCATCTCACT CAACCAATAA TGACAGGCAA ATGGAATAAC TTGGCTATAT
    AGGATTGGTT GGTTAGAACA AATATGAATA GAGAGAGAGA GACTACACTA
    TACTGTTTAC TAAACAGACT TTCCAAAATT AAAAAGTCTC TGTTCTCCTC
    CTCCAACAC

AT3G06440.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2377 Blast hits to 2343 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1703; Fungi - 5; Plants - 611; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06440.2

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2239 Blast hits to 2201 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 1648; Fungi - 5; Plants - 523; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR