1. Home
  2. Mutant Lines
  3. GT23500

GT23500

CSHL Arabidopsis genetrap mutant lines

Original: GT23500

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23500

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22239648 [Map]; Strand: w
      • AT3G60170.1 - [+] show detail - transposable element gene
        Distance: 3117; Region: intergenic
      • AT3G60176.1 - [+] show detail - other RNA
        Distance: 507; Region: intergenic
    Flanking Genome Sequence: GT23500 - 5-prime edge 
    ATAAGTGAAA ATGTCAATCA AGCTTAATTA ATATGTAAGA AAGTAATTGA 
    ACTTATCTTT TATGAGGGAG GTCGTCGAGA CAGAATTGGA GATCGCATCA 
    TTGATGAATG AGTGGAAATC TTGAGCGATT GCTAGTGATG ATCCATTGTC 
    ACTTGTTGGT GTAATGTACT TCCTTTTGCT GATTTATAGA AGAACTGATA 
    GCTTCCGTTT GAACCGTTAA ACTATTGATC CCACCGTTGA ATCTTTAGCT 
    GATATTCCCA CGAAGAGCTT GTCCGAGCTT TACTCACATC CGATAATGCC 
    TGAGGCTTCT ACCGTCTTAT GAAGTTGCTG TGACAAAGAG TAATTTTTCT 
    TCCTTTGTTA TATTTGTTTT TT

AT3G60170.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 7.6e-229 P-value blast match to gb|AAO73527.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)
Link
InterPro Scan - TAIR

AT3G60176.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR