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GT23545

CSHL Arabidopsis genetrap mutant lines

Original: GT23545

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23545

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25281916 [Map]; Strand: c
      • AT5G63000.1 - [+] show detail - Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 fam...
        Distance: -379; Region: promoter
      • AT5G63010.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23545 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTATGTGGAA GATGTTGGCT 
    TGAATCTTAT CCAGAAAATT GACACTGCTG GAGTTTTCGA TATCCGGTGG
    AGTCGTGGTG GCGATGGAGG AGACGTGGCG CTTGCTCAGG CTGATGCTGA
    TGGATGCTTG ATAGTTTACA AGATAGATGA GACTGAAAGT AAAGGTACTA
    ACCTTTTGAT CTTTGTAATG GAAACATCCG AATCAATGGA CTCAGTGATT
    GAGTGAAATA AAAATTGGAA CTTTGGTGTA ATCTGAAGAG AGATCTGTAA
    AGGATCAATT GATGGGTTGT TCTTAATATG CAGCTAAGTT TTGTTTTGTT
    AGCTTGTTGG TGATCTGAGT AAAGTTTTAT GCTTGAAACA GGTACTTTGA
    GAGAAGTCTC CGGGAAAAGA ATCAGCTCAT CAATGTGTCT TTGTTTGGAT
    TGGGATCCAT CATCAACATC AATCGTTGTT GGTTTATCAG ATGGCTCTGC
    TTCAGTTGTT TCATTCACGG ATTCTAATCT AGAAACAGTT CACGAATGGA
    AAGGGCATGA CTTTGAGCTT TGGACGGCGT CATTCGATCT CAACAATCCT
    AATTTGGTCT ATACTGGATC AGATGATTGC AAGTTCAGCT GTTGGGATAT

AT5G63000.1

Model type
Protein coding
Short Description
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Computational Description
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 40 Blast hits to 40 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G63010.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G32950.1); Has 4234 Blast hits to 3983 proteins in 322 species: Archae - 2; Bacteria - 280; Metazoa - 1738; Fungi - 841; Plants - 754; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink).
Link
InterPro Scan - TAIR