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GT23595

CSHL Arabidopsis genetrap mutant lines

Original: GT23595

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23595

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1572072 [Map]; Strand: c
      • AT4G03540.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: 589; Region: intergenic
      • AT4G03550.1 - [+] show detail - glucan synthase-like 5
        Distance: -1276; Region: intergenic
    Flanking Genome Sequence: GT23595 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT ATCAATTTGT TTGTGTTGGC 
    TACTAGTTAA ACTTGTATTA GTGAGAATTT AAGCTGGGAT AAAATATTTG 
    AGCAGAGAAT TTGCGTATGG GACATTCTAT CCTTTTAATG AAATCATTAT 
    AAAATGGAGA AAAGTCACTA GAAAAAGAGA GGGAATGGGG CGAGAGAATG 
    AAGGAGGGGT CCCCATGTG

AT4G03540.1

Model type
Protein coding
Short Description
Uncharacterised protein family (UPF0497)
Computational Description
Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G03700.1); Has 607 Blast hits to 607 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G03550.1

Model type
Protein coding
Short Description
glucan synthase-like 5
Curator Summary
Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.
Computational Description
glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Link
InterPro Scan - TAIR