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GT23603

CSHL Arabidopsis genetrap mutant lines

Original: GT23603

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23603

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18608225 [Map]; Strand: w
      • AT3G50180.1 - [+] show detail - Plant protein of unknown function (DUF247)
        Distance: -1063; Region: intergenic
      • AT3G50190.1 - [+] show detail - Plant protein of unknown function (DUF247)
        Distance: 889; Region: intergenic
    Flanking Genome Sequence: GT23603 - 5-prime edge 
    ACAAACACAC CCTTTTTTTC TTTAACAAAT CGATATGTAT CGATTAATAA 
    TACAGAAGAG GAGAAGCACA TTACTAACGA ATTAAACTTG AAGCTGAAGT 
    TGGTGGATTG TGTACAGAGA AGGTGAGAGA TATCTGTCTT CCATTACATA 
    CCAAAGTTGG TCTGGACTTT ACTCACGAGA TGCTCTCCAT AGACAGCTCT 
    TTTGAAAACT TGGCATCTTC ATCTCACTCG A

AT3G50180.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50120.1); Has 18820 Blast hits to 10177 proteins in 649 species: Archae - 36; Bacteria - 1683; Metazoa - 7662; Fungi - 1574; Plants - 4386; Viruses - 842; Other Eukaryotes - 2637 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G50190.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50140.1); Has 1131 Blast hits to 1013 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1129; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR