1. Home
  2. Mutant Lines
  3. GT23656

GT23656

CSHL Arabidopsis genetrap mutant lines

Original: GT23656

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23656

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26825236 [Map]; Strand: w
      • AT1G71140.1 - [+] show detail - MATE efflux family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23656 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TATCTTGTCC AATAAGAGAA 
    AGTATATCAC CAATGTAGCT CCAGAGAACA GAGAGAGGAA TACACACAAG 
    AAACAAAGAG ACAATTCCTG TGTAAGTATG AACACCAAGC TTCTCGTATT 
    GCTTAGCTCC ATTAGCTTGA CCACATAAAG TCTCCAACGC ACTAGCCAAT 
    CCAAACTGTG TGATTACCAC AACCACAATT TAGAATCTTA AGCTAATAAA 
    AAAGAAAAAG AGAAAGATCA AGAAAGAGAC ATACAACGAC GCTGAAACCG 
    GTGACGCTGC AGAAAGAAAC AGCAATGGCG GTGCTAGAGA GGAAAAGCTC 
    ACCGAGATGA CCAACCATCA TTATAGATAT CACCTGAAGA ACATACATAG 
    ACGAGTTCAC TGCAATCATC GGACCGGCGA TGTAACTAAG TTTCTTCGTT 
    TCCCGCAAAA ACCCATCTTT CTTGTTTACT TCATCTCACT CGACCAGATC 
    ATACCGTTAC CCGACCGGAT CGTATCGGTA TATTCATCTC ACTCGACCAG 
    ATCGTATCGT TACCCGACCG GATCGTATCG GTATATTCTT CTCACTCGAC 
    C

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30192415 [Map]; Strand: w
      • AT1G80300.1 - [+] show detail - nucleotide transporter 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23656 - 5-prime edge 
    CTGATTCTGA GGGATACAAA GGATGTCTTG GTGGTGACGG CGAAAGGAAG 
    TTCTGCTGAG ATTATACCTT TCTTGAAGAC TTGGGTGAAT CTTCCTATGG 
    CCATTGGGTT TATGCTCCTC TACACTAAAC TCTCCAATGT TCTCTCCAAG 
    AAGACTCTGT TTTACACTGT TATTGTCCCT TTCATCATCT ACTTTGGGGC 
    CTTTGGTTTC GTCATGTACC CTCTCAGCAA CTATATTCAC CCGGAAGCTC 
    TCGCAGATAA GCTCCTTACA ACCCTCGGCC CAAGATTCAT GGGTCCTATT 
    GCAATATTGC GGATTTGGAG TTTCTGTTTG TTTTATGTTA TGGCTGAGCT 
    TTGGGGTAGT GTGGTGGTCT CAGTTCTCTT CTGGGGCTTT GCTAATCAGG 
    TGACTAAACT GGTCTATCAT TTGAACTTGT GCTGGTCTAT GGATTTTTGT 
    GTATCTTCAT TTGTTGTTTG AAAGATTGGT GTGTTTATGA TTTGATGATA 
    ATAGTCTTTG ATTGCTACCG ACTTTGATGT GTAATGATGC ACTGAATATG 
    ATTACAAGCG GTGATGTGTG TGTTTTAAAG CATTGCTTCT ATCTCTTTGC 
    AGATCACAAC TGTGGATGAA GCCAAGAAAT TCTATCCTTT GTTCGGACTT 
    GGAGCCAATG TTGCACTGAT TTTCTCAGGA AGAACCGTGA AATACTTCTC 
    TAACTTGAGA AAGAATCTTG GTCCTGGAGT TGACGGCTGG GCAGTTT

AT1G71140.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80300.1

Model type
Protein coding
Short Description
nucleotide transporter 1
Computational Description
nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink).
Link
InterPro Scan - TAIR