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GT23667

CSHL Arabidopsis genetrap mutant lines

Original: GT23667

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23667

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17256514 [Map]; Strand: c
      • AT1G46624.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT23667 - 5-prime edge 
    TGAGAGCAGG TCCGGACAAA TTTTCAGAAA ACAATTTGCA AAGCCCGGCA 
    TCTTCTTCTC GCTCGACTAG GGGGACCCGT CCGGCGATGA CTTGGAAGGA 
    AGTCAAGTGC TCCTTCGGAT CTCCTTTTCC ACTGTAAACG GGAAGCTTGA 
    AATCTCGGAA TTCGCGGATG CGCAACTTAG AGATTCTTGG GGTGAAAGGT 
    GTTCTCCTTG TTGCTTCGAT GACCTTATCC ACTTCGGGAG CCGAAGTAGT 
    GGCTTGATGG ACTCTTGCAT TCATGGCCCA GATTTGGTCT TGAAGGCTTT 
    GGAGCTCCGA ATTGACTGCG TTTGGCTCTT GTCGAGGATC GGAGATTGGG 
    ATTCTGATGG AGGAATCAAG CGGAAACGGA GTTCGAGCTA TTCCTCCATC 
    TGAAATTGCG GCAAGTCCTG CTGGTGAAGA TGAGGTGACA GGATTCTGAG 
    TCGACGTCGC CCCGACTTCA ACCGGTGGTG GCGGAGTCTG CTGGCCAGAC 
    GCTTCCTGGG AATTTTGGAC GCTCGGACTG ACGGTGCCCT GGAAGTTGAG 
    TCGCGTTCGA GCTCCAGTAA TCCGCGCAGT TCCTGCAGAA AGTGAAATCG 
    ACTCGTTTCT GCGTATGCGT TGTGAGCCGA TCT

AT1G46624.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 4.3e-213 P-value blast match to GB:AAD11615 prpol (gypsy_Ty3-element) (Zea mays)
Link
InterPro Scan - TAIR