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GT23680

CSHL Arabidopsis genetrap mutant lines

Original: GT23680

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23680

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3337426 [Map]; Strand: c
      • AT3G10670.1 - [+] show detail - non-intrinsic ABC protein 7
        Distance: -39; Region: promoter
      • AT3G10680.1 - [+] show detail - HSP20-like chaperones superfamily protein
        Distance: -347; Region: promoter
    Flanking Genome Sequence: GT23680 - 5-prime edge 
    ATCACACAAA GTGATGTCGT TTTATTTGTT ATTTCCATTT TTTTTTTGTT 
    CCCTTTTAAT TTAACCTAGA ACCCAATATA TATTTTACGG GGCTTTCACC 
    AGGGAAAATT AAAAAAACCC CGGGACCAAA CAAACCACAT CCTTTCCCCG 
    AAAAAAACCC CCCCCGCCTT CTTCCCCCCC AATTTCGGTC CCCTGGGCCG 
    GGGTTACCCA ACACCCCCTC CCCCCAAACC CCAAACCTCA TTTCTTTCCA 
    CCGGTTCCTC CCCCCC

AT3G10670.1

Model type
Protein coding
Short Description
non-intrinsic ABC protein 7
Curator Summary
Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged Fe
Computational Description
non-intrinsic ABC protein 7 (NAP7); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: iron-sulfur cluster assembly, thylakoid membrane organization, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase SufC, SUF system FeS cluster assembly (InterPro:IPR010230), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 256475 Blast hits to 243565 proteins in 3618 species: Archae - 5159; Bacteria - 209774; Metazoa - 3736; Fungi - 3348; Plants - 2780; Viruses - 4; Other Eukaryotes - 31674 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10680.1

Model type
Protein coding
Short Description
HSP20-like chaperones superfamily protein
Computational Description
HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G04890.1); Has 10151 Blast hits to 7022 proteins in 776 species: Archae - 41; Bacteria - 1142; Metazoa - 3661; Fungi - 700; Plants - 785; Viruses - 49; Other Eukaryotes - 3773 (source: NCBI BLink).
Link
InterPro Scan - TAIR