GT23702 - RIKEN Arabidopsis Genome Encyclopedia
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GT23702

CSHL Arabidopsis genetrap mutant lines

Original: GT23702

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23702

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2748112 [Map]; Strand: w
      • AT3G09000.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT23702 - 3-prime edge
    TTACCGACCG TTACCGACCG TTTTCATCCC TATGTACATT GATGATGCCG 
    GAACTTTTGT CACAAGCGGC CGGAGGTTTC CAGTCATGCC TCGTCTTATA
    TCCTACACAC CAAAGATCGA CAATTGTGTT ATTATTACCA GAAAGAACTT
    TAAGAAACAC TCTTCTTGCG AGTCAGATCA TCCAGCTTGG GCCCAATGTT
    TAATCTATAG CGAGCTTGTG AGAAACTCTC AATCGAAGAT TTTCGGATGC
    TACTCTACTC TCAACAAAGA AAATTTGACT AAAATTGTGA GACGTGATCG
    TACCATATGT CTTATGGCCA TATCGATTGA GCTCTTGGAG AGGTTTCTAC
    CATATCCAAG GCTGTTAAAA GCTGAGCTAG ATTTCCCCGA TCCTCGACCA
    CCATTCTCGG TTAGCCGCGG TGGACCTAGT TTCCTCATGT TCATCTCTCT
    CGACCACATT TTATTACCCA TAGCCACTGG GCTCATGTTA TCACAGCCAC
    TTCCGCCGGT GCTTGCCTTT GCTCGCCCAC GCACACCAGT GAGACTCCCT
    TTGGTGTTCC AGATAAGACC CCGACCTCTG GACGGCGAAC AAGATTGCCT
    TCTTGCATTT CCGCTGCCCC CGCTG
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2748198 [Map]; Strand: w
      • AT3G09000.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT23702 - 5-prime edge
    TGTACAGTGG TGAGAAGTCG GCCGGGTAGT GTCTCAAGCT CTCCGGTGGC 
    CACGAGCAGC ACTGTGAGCT CATCTGACCC GAGTGTTGAC AACATCAACA
    TTCTGTGCTT AGACGGAAAC GAAGCCGAAA ATGATGATCT TCTTAGTGAA
    AGAAGCTATG CTGCTTCTCC GCGGAACCAG TACCCCAAGT TCATCTCACT
    CGACC

AT3G09000.1

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 72642 Blast hits to 41597 proteins in 1862 species: Archae - 219; Bacteria - 10073; Metazoa - 26321; Fungi - 16532; Plants - 3439; Viruses - 1862; Other Eukaryotes - 14196 (source: NCBI BLink).
Link
InterPro Scan - TAIR