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GT23703

CSHL Arabidopsis genetrap mutant lines

Original: GT23703

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23703

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16433403 [Map]; Strand: w
      • AT2G39350.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: -846; Region: promoter
    Flanking Genome Sequence: GT23703 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TAGTACAAAC CATTTACAAG 
    TTGGCATCAA TTTTGCATGA CTTTTTTGTT TCGATAATAT TTTCGCTTTT 
    TAACTACTTC ATCAATCATG TCAATCAGGC TTTGACTACC ATAGTAGAAA 
    ATTTGTCGTT TCCACTTTTA AAAATTGCTT TTAGTTACCT AATGCAAATT 
    TTTTGTCAAC TATATAAAAG GCTAAAACGC AATCAAGAAT ACTGATTTCA 
    CAAAAAGGCA GATTTTAGAT GCTTCTAACT AGGCATAGAC ATTAGACATC 
    ACACGGTGTT TGTTACCTCT ACATTGTAGT ACTTGAAAAC TCTTCTTTAA 
    AAGCGACGGG CACCGGTAAA ATATTTGGAT TTTTTGTGTG TGTGATTAAT 
    TCTACATAAA TTCACAGAAT TTGAACATTT TTTTACTCAA AAATAGTAGT 
    ATGAAATAAG CATTAATGGA GGCAACTATG GGAAACTCAC ACGAAAGTCC 
    TCGACCCATG CATATGTTAG ATGAACAAAC ACCCTTTACC TAATTGGCTA 
    ATTCACAAGT CAATAAAACC CATTTCGCCA CGTGTCATAT GTTCCCACCG 
    ATATTTTTAA TTTCTCGTTA CCCCAAGAAA AAGAAGAAGA AAAACGTATT 
    TGGTAATTTC TACTTTAAGA AACTTTAGAT ATGATAGGTG GACTCTTCAC 
    CTTCCCCAAA TAAATAAACA ATAAATCAAA AACGCATTTA CATCCAAACA 
    GTCAAAATAT CAACCTAACA TACTTTTCCC ATGCAACTCA CCC

AT2G39350.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 383683 Blast hits to 350637 proteins in 4113 species: Archae - 6942; Bacteria - 305769; Metazoa - 8575; Fungi - 6049; Plants - 5390; Viruses - 9; Other Eukaryotes - 50949 (source: NCBI BLink).
Link
InterPro Scan - TAIR