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GT23747

CSHL Arabidopsis genetrap mutant lines

Original: GT23747

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23747

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 349105 [Map]; Strand: c
      • AT3G02040.1 - [+] show detail - senescence-related gene 3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23747 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCT CTATCTGCCA GATTGGGACG 
    ACAAGACGGC AGAGGTGATC GGAGGAATAG AATAGGTTGT CGACAAGCTT 
    GCGTTCAATG TTGAAACCGA GGTTTGGATT CTCTACTTTC TCAAAAGCCT 
    CTTGGAGAGT ACAGAAAGAG TCGTCGGTTG CGACGCTCCA CTTATGGATC 
    TTCCCTTCCT TTGACTTTCT CAGCAAAGGC TTTCCTGTCT TGCCTGTATC 
    CCTCTGTGGC CCGTAGGACA TGAACTCCGA CAAGCAAACC TCCGTGACCC 
    TCTTCTCGTA CACCACTCCC TGTTCCTCGG AGTAGATGAA GTCGTCGTGG 
    AATATGATTG GGCAGCCATC TCTGGTGACC TGCGCGATCA ATTAAAAAAA 
    TAAAGAGATC AGATCAGATC TTTTTTTTTA CCTTTTCTTT ACCGGTTTTT 
    TTTTTTGGGG CAAAAAAAAA AAAGGGCCCC AAATTTGGCC CCCCCCGGGG 
    GTTTGCGCGG GGGCCCCGGG GGGGACCCAA TTTAAAAAAA AAAA

AT3G02040.1

Model type
Protein coding
Short Description
senescence-related gene 3
Computational Description
senescence-related gene 3 (SRG3); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G41080.1); Has 1727 Blast hits to 1696 proteins in 532 species: Archae - 28; Bacteria - 1003; Metazoa - 245; Fungi - 173; Plants - 101; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
Link
InterPro Scan - TAIR