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GT23777

CSHL Arabidopsis genetrap mutant lines

Original: GT23777

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23777

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29637901 [Map]; Strand: w
      • AT1G78830.1 - [+] show detail - Curculin-like (mannose-binding) lectin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23777 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT ACGTACAGCA TGGTGTTGAA 
    CACCAAAGGT TTAACCATGT ACGTTAACAA AACCGGTACG CCGTTAGTTT 
    ACGGCGGATG GCCAGATCAC GATTTCCGCG GCACCGTCAC TTTCGCCGTT 
    ACAAGAGAAT TCGATAATTT AACGGAGCCG TCAGCTTACG AGCTTCTCTT 
    AGAACCGGCA CCACAACCGG GTAATAACCG CCGGTTACTC CAAGTCAGAC 
    CAATCGGAAG CGGAGGAGGA ACTTTAAATC TGAACAAAAT CAATTACAAC 
    GGAACGATTT CGTATCTTAG ACTCGGATCT GACGGGAGTC TCAAGGCTTA 
    CTCGTATTTC CCAGCAGCTA CGTATCTCAA ATGGGAAGAG AGTTTCTCAT 
    TCTTCTCACT CGACCAGATC GTATCGCTAC CCGACCGGAT CGTATCGGTA 
    TATTCATCTC ACTCGACCAG ATCGTATCGT TACCCGACCG GATCGTATCG 
    GTATATTCAT CTCACTCGAC CAGATCGTAC CGTTACCCGA CCGGATCGTA 
    TCGGTATATT CATTTCACTC GACCAGATCG TACCGTTACC CGACCGGATG 
    GTATCGGTAT A

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT23777 - 5-prime edge 
    ATCTGAGCCG TTCGAATCAG ATGTACGGCT AACGAGTTTC CTATAAAGGT 
    TAACTTTTAA CGATTG

AT1G78830.1

Model type
Protein coding
Short Description
Curculin-like (mannose-binding) lectin family protein
Computational Description
Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; LOCATED IN: apoplast, cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227); BEST Arabidopsis thaliana protein match is: D-mannose binding lectin protein with Apple-like carbohydrate-binding domain (TAIR:AT1G78820.1); Has 2662 Blast hits to 2603 proteins in 85 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 2651; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR