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GT23780

CSHL Arabidopsis genetrap mutant lines

Original: GT23780

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23780

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4702441 [Map]; Strand: c
      • AT1G13700.1 - [+] show detail - 6-phosphogluconolactonase 1
        Distance: -6418; Region: intergenic
      • AT1G13710.1 - [+] show detail - cytochrome P450, family 78, subfamily A, polypeptide 5
        Distance: 284; Region: intergenic
    Flanking Genome Sequence: GT23780 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTTAGAT ATTTGGATCA 
    CGTTGTTCAA CATGCTAACA TTAACAAGTG ATCGTCCTAT TGTCATATCA 
    TTACTCGGTT TCATCTCACT CGACCAGATC GTATCGTTAC CCGACCGGAT 
    CGCATCGGTA TATTCAAACT CACTCGACCA AGAGGGTATC GTTACTCGAC 
    CGGATCGCAT CGGTTTATTC ATCTCTCGCA ACTACAATTT ATCGTTACTC 
    TACCGGATCG AAACGGAGCG CGATATTTGG ACAACAAAAA TATAACGAGA 
    CTCGATTAGA GCGTAACCTT ATCTAATCAA TTTTATACAT AAAAAAACAT 
    TGACACGACC AGAGAGGGGA GGCGATAACA TCATGAAGCA TCACAAAGTA 
    AAATAGAACA CTTACACCAA AACCCTAAAG AAGTTCGACC AACGTGCCAA 
    AACCCTAACT TCCTTCCCAG CCATAATTAT TATTAATTTT ATTAATAAGT 
    ACTAGCCATA CTTCATTAAA CAAGTCCCCG ACACGATAAT CCATCAAGCG 
    AAACCAACAT TCCTTGGAAC AGCCTTGCAC TTCAACGGAT TCTTCATCTC 
    ACTCGACC

AT1G13700.1

Model type
Protein coding
Short Description
6-phosphogluconolactonase 1
Computational Description
6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13710.1

Model type
Protein coding
Short Description
cytochrome P450, family 78, subfamily A, polypeptide 5
Curator Summary
Encodes the cytochrome P450 CYP78A5 monooxygenase. Contributes to the generation of a growth-stimulating signal distinct from the classical phytohormones that prevents proliferation arrest, promoting organ growth.
Computational Description
"cytochrome P450, family 78, subfamily A, polypeptide 5" (CYP78A5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 10 (TAIR:AT1G74110.1); Has 31179 Blast hits to 31066 proteins in 1571 species: Archae - 49; Bacteria - 2905; Metazoa - 11364; Fungi - 6716; Plants - 9120; Viruses - 3; Other Eukaryotes - 1022 (source: NCBI BLink).
Link
InterPro Scan - TAIR