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GT23781

CSHL Arabidopsis genetrap mutant lines

Original: GT23781

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23781

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18974548 [Map]; Strand: w
      • AT2G46192.1 - [+] show detail - other RNA
        Distance: 415; Region: intergenic
      • AT2G46200.1 - [+] show detail - unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae ...
        Distance: 114; Region: intergenic
    Flanking Genome Sequence: GT23781 - 3-prime edge 
    TACCGACCGT TACCGACCGG TTTCATCCCT AGTTTTGGAT CCGTGTTAAT 
    TTTTCCAACT TGACACACCA TCTGGTAGAT AGTCCATTGG ACAGAATTAT 
    AACCATCCTC AAGTCGTCCC ATAACATTTA CCAATTGATC AATTATTTGC 
    AGATTAAATT TCCCCGAAAA TTAAGTTAAA CCTTTTTTGA GGTGAGTTTA 
    TTTGAAAGCC CTATCTCTTC TATATCATAT CTTAAAGAAG TGATTCAGCT 
    GTGGGGAAGA TGATTGTTGA GCTATTCAAT AGAACGATGA ATCACAACTG 
    CCCATCTGCC CCAAATTGGA TATTGCAAAG AAATCTTTCG TGAAAAGTGC 
    ATTTGAACGC ACTAAGCCGA TACACACATA TCTCTGCTTT TGGAATTTTC 
    AACAGTGGTG TTGAAGTTCA AGTAGATCAT TATAAGTTCA AAACATCACA 
    GATAACTTGC AACAATTGCT AAATTCACAA ATTTCCCCGT CAAAATGTAT 
    ATCTAATCTA ACTAATACAA TTAGAGTAAA GTTGAATCAA ACGAATTGTG 
    GGGAAGATGA TTGTTGAGCT ATTCAATTGA CATTGAATCA CAACTGCCCA 
    TCTGCCCCAA ATTAATGTCG CAAAGAAATC TTTCGTACAA AGCGCATTAC 
    ATCGCACTAA GCCGATACAC ACAATCTCTG CATTTAAACA AAACCAACAC 
    TGAAACTTCA TATGAAACTA GC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18974624 [Map]; Strand: w
      • AT2G46192.1 - [+] show detail - other RNA
        Distance: 491; Region: intergenic
      • AT2G46200.1 - [+] show detail - unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae ...
        Distance: 38; Region: intergenic
    Flanking Genome Sequence: GT23781 - 5-prime edge 
    TTTCTCTCTG TCGACACTAA GTATATTGAT GACTTAACTC ACTGAAGGTT 
    GAAATTCCAG TGACAAGTGA CGTATTTAAA ATGTGTACTT GAATATAAGT 
    TGCCACTAAT GTGAAACACG AATTCCAGTG GTAAGAATTG GTTCTACAAT 
    GACGTTGTAA TCGAGGATTA AGATATCGCT AAAGACTTGT TCTGTTCTTG 
    ATTATTAAAC TTGTGATCTG TTTCTGTTTC AAAACAGAGG CAAATGACCA 
    AATCGCATAA TCTTGAGTAA AGGGTGTTGC ATGAAACCAG TATCCTAGAA 
    TCCTAACAGC GACTAACTAA GATCTCTTTT GGGAGTATTA ACAAGACAAG 
    AAGCCCAAAT CTCATTAGCT GGTGGCGACG GCTGGACCCA GTGTCCAGGA 
    ATCCGGCTGT ATATAGACAT CAAAACATTT AGCAAAACAT CAAAAGCGCT 
    AAATTATGAA ATATTGTTTT GGTAACTTAC CTTCCTCCGG CACTCAGATA 
    TGCATCCCAT TCTCTTCTGA TCTATATTAC CAGAAACCAG CTGAATCACT 
    TCTTTAAGAT ATGATATAGA AGAGATAGGG CTTTTAAATA AAACTCACCT 
    CAATAAGTCT ACCCATGTCG ATATTACTTC CGTAGTAGTA GTGATAGACC 
    TCGACTGGTA AATTCGATAT ATTGTCGCAA CCATTGTCAG GAGCTTTCAT 
    AGTCCTTTCA C

AT2G46192.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT2G46200.1

Model type
Protein coding
Computational Description
unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188; Metazoa - 1070; Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes - 1318 (source: NCBI BLink).
Link
InterPro Scan - TAIR