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GT23817

CSHL Arabidopsis genetrap mutant lines

Original: GT23817

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23817

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1582524 [Map]; Strand: w
      • AT3G05470.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23817 - 5-prime edge
    TCTTTAGCAT TAGCAACAAT GCAAAAGAAT CTAACTTTGC AGCAGTGTAA 
    TGACACTACA ATGATCATGA GAAAAATCTG ACGAAAATAA ACCATATCTT
    TGTTCTCTTT TTAGATCTTT TCTCTGTAAA AACAAATCAT AAACACTACA
    AAGAAACCAT TTATGAGAAA AGACTCAATT TGTCTTTAAT GTATTTTTTT
    ATTATTTTTC TCTCCTTTGA GACTTTAATG CTACTCCAAG GAACCCCTGA
    ACTCTGCAAC TATAGTTGTA CTGGTAATGG TAACACCCTC TTTCTCCATT
    AACTCTCCTA GCAGAACAAC AGAGCTAATT TTGCAATTTA TACACACCAT
    TTTAGGTAAT CATCTCTTAA ATAAATAAAT TAATGCGAAT TTTTTCTTGG
    AATTAATGTG GTGACAATAT GAAGCTTTTT AGTTTAAGTT TGAAAACAGC
    TTTTTTGTTT AAGGAAGAGA TTAAAAAGGA GAAAATCTAG TAAGCAAAGA
    GAAGATAGAA AGAAGCGTGA AGGTGTTGGT GTGAAGTGGG TCCTCTTATT
    GTTGGCACAT TTGGCTTCTT CAGCCATTTG GTTATTTACT GTACAAGCTT
    TCTTTGTTCA TCTCACTCGA C

AT3G05470.1

Model type
Protein coding
Short Description
Actin-binding FH2 (formin homology 2) family protein
Computational Description
Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homolog 6 (TAIR:AT5G67470.1); Has 5495 Blast hits to 4819 proteins in 357 species: Archae - 2; Bacteria - 168; Metazoa - 2550; Fungi - 658; Plants - 1088; Viruses - 235; Other Eukaryotes - 794 (source: NCBI BLink).
Link
InterPro Scan - TAIR