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Mutant Lines
GT23877

GT23877

CSHL Arabidopsis genetrap mutant lines

Original: GT23877

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23877

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 296043 [Map]; Strand: w
- AT3G01820.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -585; Region: promoter
- AT3G01830.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -11; Region: promoter
- AT3G01830.2 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -11; Region: promoter

TTACCGACCG TTACCGACCG TTTTCATCCC TAGTTTGAAG ACTATTACTT 
GTTCACCTTT GCAAAATATA TAGAAGATGA AGGAGAGACG TTTGAAACCC 
GTTGAAATAT AAGACCGTAC TTTTAACACA TGCGGATTGT GGACTTGTTG 
ATTTGTTTAC GGCGCTACGT ACAAAAGAAG AAACGCTTTG TTCCCGCGGC 
TTCTATGTTG ACAAGTTTCT ATTTCTGTTT TTATTATGAA CAACAAGTAA 
AGTTCATCGT TATTTCGTTA CTAAAATATT ATATGACGAC GAAGTTTCCG 
TTGACGTTGA CTAGTCTTCT ATAAAAAGAA ACTTGTCAGG CTTCATGTGA 
ATAAGTATCT TTACTTTTTA TTTATTTCTT TGGGTGGTTA ACAATGGTTG 
ACAATTTCGG TCGTTGAATA TAATTAGGTG GGCCAAGTCT GGGCTAAGAG 
ACGTTTGGGC CTTATTAAAC GTGTTTCAGT GTTGTCCATT CAATTCTCAC 
TCAAATAATT ATCTGAGCGA CAAATAGGAA GCGGACATGT GGGCAGTGGC 
AATTTCGTGG ATTCGTGAGT AAAGGAGTGG CAATCAATTA AAAAAGAAAG 
AAAGAAAAGA GAGAGTGTCA GCTGTCCCAT AAACCTCGGC CCTCCGTCTC 
CGTTCAAACC CCTCTCTTTA AGCTCTCTCT CTTTCTGTGG CTATTCTCTT 
TCTCTCTTTC TCTCTGA

5 prime edge [+] show sequence

Chromosome: 3; Position: 296124 [Map]; Strand: w
- AT3G01820.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -666; Region: promoter
- AT3G01830.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: 0; Region: exon1 (CDS)
- AT3G01830.2 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: 0; Region: exon1 (CDS)

CCTGCTTCAA CTATAATCAT TTTCTCCTAT CTCTCGCTCA AGTCTTCTTC 
ATCGATCTTC TATGAAGAGT GAGAACGTTA ACAAACGTGA TGAGTATCAA 
CGAGTCTTTA GCTGCTTTGA CAAGAGCCAC CAAGGCAAGG TATCTGTTTC 
TACAATCGAA AGATGCGTCG ACGCTATTAA GTCTGGCAAA CGTGCAGTAG 
TTGATCAAGA AGATACTACA AATCCAAATC CAGAGGAGTC GACTGATGAT 
AAATCGTTGG AGCTCGAGGA CTTCGTGAAG TTGGTGGAAG AAGGAGAGGA 
GGCAGACAAG GAGAAGGATT TGAAGGAAGC TTTCAAGTTG TATGAAGAGA 
GTGAAGGCAT CACACCAAAA AGTTTGAAGA GGATGCTTAG TTTGTTGGGT 
GAGTCCAAAA GTCTCAAGGA CTGCGAGGTT ATGATTTCCC AATTCGATAT 
TAATAGGGAT GGGATTATCA ACTTTGATGA GTTTAGGGCC ATGATGCAAT 
AACATATTCA TTAGTTACAA ATATCATTTT TAATCTATTA TACTACTCTT 
CTTTACCAAA GGCTTGTATG AACTCTCTGA AATTAAGGTA CTCTCTCTAT 
CTATTACTGC CTCATCTTCT TCATCTCACT CGA

AT3G01820.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine kinase (TAIR:AT2G37250.1); Has 9469 Blast hits to 9393 proteins in 2915 species: Archae - 95; Bacteria - 5951; Metazoa - 891; Fungi - 419; Plants - 430; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01830.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 5650 Blast hits to 5606 proteins in 833 species: Archae - 0; Bacteria - 6; Metazoa - 2238; Fungi - 938; Plants - 1778; Viruses - 0; Other Eukaryotes - 690 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01830.2

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin like 37 (TAIR:AT5G42380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR