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GT23921

CSHL Arabidopsis genetrap mutant lines

Original: GT23921

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23921

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 14913192 [Map]; Strand: w
      • AT5G37540.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23921 - 5-prime edge 
    GGACACCATC TCAGTCACAA GAGCTAGTTC TTGACACCGG AAGCCAACTC 
    TCATGGATCC AATGCCATCC CAAGAAAATC AAGAAACCAC TTCCTCCTCC 
    AACGACGTCG TTTGATCCTT CTTTATCTTC ATCTCACTCG A

AT5G37540.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G66180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR