1. Home
  2. Mutant Lines
  3. GT23957

GT23957

CSHL Arabidopsis genetrap mutant lines

Original: GT23957

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23957

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1591359 [Map]; Strand: c
      • AT3G05490.1 - [+] show detail - ralf-like 22
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT23957 - 5-prime edge 
    ACTATCGCCA GGATCGCGAT GACGGCGTAG ATCGCGCGAG TGTTCGTCAT 
    CTTTAAGCCA AAACCTTCTC GGTGAATCAG AGTCTTCCTT TGTTAATTTG 
    CTTTTACTCT CTTTCTCTCT TGGAAACTTG ATTCTGTACA CAGCTGAAGA 
    CAACAGGTTA AGCGTTGGTG TGTAGCTTCT TATAACCTGA GGTTTTTGTT 
    ATAATGGGCT TGTGTATGGA TATATTAACG AAACTGCCAT TGTATTTTCT 
    CCAAACAAAA GAATAGGTAC GCGTTTATTT TTTTGTTAAT TGATTATGAA 
    ATTGACTTAT TATACGCATA TTCGTTGCTC TTTATTTTAA TCATGCAAAT 
    TACAATGTCT AAGCTTTGAA ATATTCGTTG GGTTTATTTT GAAGTTTTGG 
    ATATGTTTTC GTGCATCCAC GACTTTGTTA GTTATTAGGA CGGATTCAAA 
    TAAAATTTTA AATTACAATT AGGTTTTAGT TTTACATAGC AAAATTTTTT 
    TATTAATCCA AATTGCAATA TTTAAAAAAA GCATAATCTT GAGTCTTGAA 
    TACTATTTCT TTACAACCGA AAAAATTAAT TATGTTGATT GATTTCC

AT3G05490.1

Model type
Protein coding
Short Description
ralf-like 22
Curator Summary
Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Computational Description
ralf-like 22 (RALFL22); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: ralf-like 33 (TAIR:AT4G15800.1); Has 266 Blast hits to 266 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR