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Mutant Lines
GT23964

GT23964

CSHL Arabidopsis genetrap mutant lines

Original: GT23964

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23964

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 28904494 [Map]; Strand: c
- AT1G76940.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -183; Region: promoter
- AT1G76940.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -183; Region: promoter

TTACCGAACC GTTACCGACC GTTTTCATCC CTAATATTGT GAGTAACGAG 
AAAATCATAA TGAATGAAAA ACTTTGAATA AGTGAATTAA TAGCTGACAA 
AAATAAAAAC AAGGTAAATA TATAAACGAC AAAACAAAAG CAGAATTATG 
TTTTTATAAC TGGTTAAGTG GTTAGTATAA ATGTAGGAAA TGAGGAGATG 
GACCCAAACA CAAGAACAAT AAACAACAAA AGTAAGTAGG TTTCCATGTT 
TCCTTGGAGC TTTTCTTTTT GTTAACCAAA ACTTCATTTG TTCTCAACTC 
TTAACTCTTA ATCCTTTGCC TTAATCATCA TTCATTTTGT TTCTCTAAAG 
TCTAATCATA CAATCTATCA CCATCGCATC CTCTTAGTAT TTACTTTAAT 
TTTATCAAAT ATTTCCGCTT CAGAACTTTC CTATTAAATC TTATACTGTC 
TTGATAATAA AACTTTATAG ATACTTTCAT AAATATACAT GTAATATGGT 
TTTAACACAC ATATATATAC ATAACTATTT ATATGATCTG TATTAGTTTC 
TTGAAACGAT ATTGTCAAGT GTTATTCATG AGATTTTACG TTTCAGTAAA 
AATATTGTTC GTCTTATTCA TTAACATGTT ATTCTTAAGT TTACTTACAT 
AGAGATAATA TAATACTCAT GTACATTTGA TTTAGACTTA GAACTCAACA 
TTTCGAATAT AGTATAATAT CATCTATGAT TCTATATATG TATGGAAAAT 
TGAACTACAA CTTTAGTGTC TTGATAGTTG GGCATGCATC ATCCA

5 prime edge [+] show sequence

Chromosome: 1; Position: 28904400 [Map]; Strand: c
- AT1G76940.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -89; Region: promoter
- AT1G76940.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -89; Region: promoter

CGTGATTCAC ACATTCACTT ATCTTTAGAC TTTTTTAGAT CCACGTAAAT 
CCAACTTTAG TTAAATGGGC CTTAAAATAG TGATTTAGCA GCCCGTTAAT 
CCAACGCGGA AATTGAGATC TGTTGCCATA AAACGGGCCG GGTCATCGAG 
ATTTCGGATC TTTAAGACAA AATAATCAGA AACTTCGAAA TCGAGAAGCA 
AGAAATTGGA ATCAATAGAT TTGAGAAAAC TTTTGATTTC GAGAGTGCTT 
CGGAGCAGAA GAACGAGCAA AGCTAGGGTT TCCATCTATC AAATCCAGCT 
ACAATCGAAC CTATTCATCG AAATTAGGGT TTTTTTTTTG GGCCCTTAAT 
TTTTCCCTTC TAGAAGCTTC TGATCCTTCA ATTTCCAGGG GGAAGGGGTA 
CTGGAACCAC CACCAACAGC AACATCATCC TCCTGGGGGT CCTATAAAAA 
GCCCCCCTTC CAATTTCGGA AAGCCCCGGA GTCCTTTCCC GTTTCCCCAA 
CACATAAAAA GTTATGCTCC CATTTTGTTT GAAATAAAAA ATGTTTGTCC 
TCTTGTAAA

AT1G76940.1

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleotide binding;nucleic acid binding (TAIR:AT1G21320.2); Has 631 Blast hits to 628 proteins in 151 species: Archae - 0; Bacteria - 4; Metazoa - 278; Fungi - 177; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G76940.2

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleotide binding;nucleic acid binding (TAIR:AT1G21320.1).
Link: InterPro Scan - TAIR