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GT23968

CSHL Arabidopsis genetrap mutant lines

Original: GT23968

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23968

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 134251 [Map]; Strand: c
      • AT2G01250.1 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: exon2 (CDS)
      • AT2G01250.2 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23968 - 5-prime edge 
    CTATCGATTT ATCGTCGTTA ATCATTGAAT CTGGGTTGTT GATCTGCAGG 
    ATTCGGAAAT GGTTGAGTCA AAGGTTGTAG TTCCAGAGTC GGTGTTGAAG 
    AAGAGGAAGA GAGAGGAGGA ATGGGCTTTG GAGAAGAAGC AGAATGTTGA 
    AGCCGCCAAG AAGAAGAACG CCGAGAACAG GAAGCTTATC TTCAAAAGAG 
    CCGAGCAATA CTCCAAGGAA TATGCCGAGA AGGTAAACAT TTTTATCCTC 
    CAAATACAAA TACTTGGAAA CTGTAGTTGA TCTTCTCTTT TATCCTTGAT 
    AGGAGAAGGA GTTGATCTCG TTGAAACGCG AGGCCAAGCT TAAGGGAGGT 
    TTCTATGTTG ACCCTGAAGC TAAGCTCTTG TTCATCATCC GTATCCGTGG 
    GTATGTTATA CTGTTGTTGT TTGTCTTATA AGCATTTCTA AAGCCAGGGT 
    CTATGTTGTT GTCTTATCTG TTGTTCTTTT TAATATTGCA GTATCAATGC 
    CATTGACCCT AAGACTAAAA AGATTCTCCA GCTCTTGCGT TTGAGACAGG 
    TTCGTGTATT ATTGTGTTTG TGTAGATTAG TCTTTTGATG AATTGGCATA 
    AACTGCTAGG TTGTTTCAAT ACAATGTTGT CATTAGTCTT AGGTTAGGTC 
    T

AT2G01250.1

Model type
Protein coding
Short Description
Ribosomal protein L30/L7 family protein
Computational Description
Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1297 Blast hits to 1295 proteins in 388 species: Archae - 210; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01250.2

Model type
Protein coding
Short Description
Ribosomal protein L30/L7 family protein
Computational Description
Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, chloroplast, plasma membrane, large ribosomal subunit, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1075 Blast hits to 1075 proteins in 310 species: Archae - 55; Bacteria - 0; Metazoa - 442; Fungi - 204; Plants - 182; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink).
Link
InterPro Scan - TAIR