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Mutant Lines
GT23981

GT23981

CSHL Arabidopsis genetrap mutant lines

Original: GT23981

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23981

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 146038 [Map]; Strand: w
- AT4G00335.1 - [+] show detail - RING-H2 finger B1A
  Distance: 0; Region: exon1 (5UTR)
- AT4G00335.3 - [+] show detail - RING-H2 finger B1A
  Distance: 0; Region: exon1 (5UTR)
- AT4G00335.2 - [+] show detail - RING-H2 finger B1A
  Distance: 0; Region: exon1 (5UTR)

TCGAACCCTC CGTCGCCAGC ATTTATTCTT CACCGGAGAA TCACGACATA 
ATCAAAATCT CCGGCGAAAT CTCATGTTAT CTTCGTTATT GCTCTCATCG 
GTTATTTATT CCATCTTTTT CGGTTTTCGT GTATTTTTTG TTTTTTGGTC 
TTTTCGGCTT CTTCAATTTT AGGGTTCGCG TATTGTTTAG TGTTGTTTAG 
CTTCTGATTT AGATGTGCTT ACTGTGTTCA TGTGTTTGGG ATTTGGCTAA 
ATCGTGTTCA TGTTGTTGTC TATTCTTATG AGAAGATCTT ATGGTAGAGT 
TACATATCAA TGATGTTACC AATTTTGAAG GTTATTGTGT TGTGTTTGAT 
TAAAATTGGT TGAAGTGTGA AATGCTTTTG CTCGAGTCAC TGTTTTCATT 
GCAACTTGAC TGAATCCTAA AGGTTGTTTT AAAATATAAA TTCAAGTTTC 
AGCTATTGAT GGGACATTAC ACAAAGCATA AGGAACATTC CCATACCTTT 
GTGTTTCTTA TGAATAACTT TGGCATCAAA TCATCTTTTT CTTTTGTCAT 
TTTGCTTACT AACACTGTAA TAATCACTTG TTATTGGGGT TTCTCAAGTC 
GGCTTTGATT

AT4G00335.1

Model type: Protein coding
Short Description: RING-H2 finger B1A
Computational Description: RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 5425 Blast hits to 5419 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1535; Fungi - 417; Plants - 2568; Viruses - 6; Other Eukaryotes - 899 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00335.2

Model type: Protein coding
Short Description: RING-H2 finger B1A
Computational Description: RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00335.3

Model type: Protein coding
Short Description: RING-H2 finger B1A
Computational Description: RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR