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Mutant Lines
GT23998

GT23998

CSHL Arabidopsis genetrap mutant lines

Original: GT23998

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23998

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 9869723 [Map]; Strand: c
- AT4G17740.1 - [+] show detail - Peptidase S41 family protein
  Distance: 0; Region: exon1 (5UTR)
- AT4G17740.2 - [+] show detail - Peptidase S41 family protein
  Distance: 0; Region: exon1 (5UTR)

TTACCGACCG TTACCGACCG TTTTCATCCC TACTCGCAAG GACCTCCATT 
GAAAAGAGCT TCCCCGGGAA AATTCCAACT CTGTTTTTCT TATCGAAAAA 
GGACTACAAA TATGATTGGA CAAAGTAGTC ACTTTCTACA ATAAATTAGA 
AAAAATGGCA TTTTCTTTTT AATAATAAAT ACAACTCTTC TATTATCCAA 
GGAAAGATTT CTGCACAAAG TTGCAACCGT ACTACTGAGT CCTAACGATA 
ATGTTAGTAG AGAAAGACTT TACAATGGAT ACTAAACATA ATCCTTTACT 
AGTGTTCTGT TTCTGATGTG AGAAGACCCA ATTCTTCTAT AAGCTTATCC 
ATATGTCTAC CATTTGTGTT GTTGTTGTTG TTGTTGTTGT TGTTGTTGTT 
GTTGTTGTTG TTGTTCTCTA TTGTAGTTG

5 prime edge [+] show sequence

Chromosome: 4; Position: 9869637 [Map]; Strand: c
- AT4G17740.1 - [+] show detail - Peptidase S41 family protein
  Distance: 0; Region: intron1 (CDS)
- AT4G17740.2 - [+] show detail - Peptidase S41 family protein
  Distance: 0; Region: intron1 (CDS)

TGCGAGCTCT TCATTATCCC CAATTTCTTT TACTAAGCCT AACAAAATAA 
ACCCTAATTT CTCAATCCAG GTACTTTTCT TTCGTATAGT TGACTCCTTT 
TTAAGTTTCT CTCCTGCAAT TCCCCAATTT GTGTCCGTTT AGCTGTGTAA 
TAGAATTTTC AACCTTTGCA GGTGAAATTG TGGGTAAAAC AACCTCCAAA 
GATTTCAAAA GCTAGCAAAT TTAGTTATGC TCGTAGTCGT AGTAACATTT 
CAAGGAGCAA TGCAGCAAAC CCAGGAGTCG TGTTCGTCTG TAATAAATTT 
CTGTGTGTTA TCGAAAGAAA TGATCAAAGG AAATTATCTG GGAAGGTTAT 
GATGAAATCT TCTGTTAATT TCAAACAGAA TCTCTCTGTT GCATTAGTTC 
GGATCGTTTC TGTTCTGCTT GTCTCTTCCT TTCGTGTGGC AACCACTGAT 
TCACCACCAT CATGTAAGTT CTGTTTTTTT TACATGTTGA AAAACCATAT 
AAATTTCGGG GAATGCAATT TGATTTCATT

AT4G17740.1

Model type: Protein coding
Short Description: Peptidase S41 family protein
Computational Description: Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: thylakoid, thylakoid lumen, mitochondrion, chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT3G57680.1); Has 9204 Blast hits to 9194 proteins in 1993 species: Archae - 0; Bacteria - 5702; Metazoa - 14; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3335 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G17740.2

Model type: Protein coding
Short Description: Peptidase S41 family protein
Computational Description: Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: thylakoid, thylakoid lumen, mitochondrion, chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT3G57680.1); Has 9160 Blast hits to 9150 proteins in 1973 species: Archae - 0; Bacteria - 5658; Metazoa - 14; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3335 (source: NCBI BLink).
Link: InterPro Scan - TAIR