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GT24006

CSHL Arabidopsis genetrap mutant lines

Original: GT24006

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24006

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18220768 [Map]; Strand: w
      • AT2G44030.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24006 - 3-prime edge 
    ACCGTTACCG ACCGTTTTCA TCCCTACATA AACTTTTCCA CTAATTAGGA 
    GGCCACAATC AGGAAAAGCT ATGCCATCCT TTATTAGAGC ACATGGAATC 
    ACACCCTCTT TGTTCAAGGC ACCTTCCGGA AATGGCTCCC AAGTTTGAGT 
    CATTGGGTCG TAAATCTCTC CCCAGTTTAC GCTGTTATGG TACTCGCTGC 
    TGCATCCTCC GTACACATTG ATCTTACCGT CAATCACATT AGCGGCTGCT 
    TCATTTCACT CGACAAGATG GTAACGAAAC CCAACCCGTT AATAACGTTC 
    TGTTTCTAAC ACTCGACCAC ACCTGTCTTC TATTTCCTTA GCCACAAGTC 
    CACCATTCAT GTAGATCTCG TAGATGGTTG AGATAACGGT TGAGCTATTG 
    TCATGTGAAT CTGGTTAAGG AACAAAAGGG AGTGGTATCA CTTTATGTTT 
    ATAAGTTTGA AAGAGTATGA ACCAACTAGG GTTAGGGTTG TTGTTGATAT 
    TCAGGTTTAA GCAGACATAC AGGCTCGTCT CGATTTTTAG GATGCGGAAT 
    CGTTCGGCTT CGAGATCAGG CAAAGCGAGG AGTGATCTGA AACTCTTGGA 
    TACGAGAGAG AGAATTGGAT CGTGGGTTCT CGAGACACGA GACAAACAGT 
    TGAAAACAAC GTCGTACGGT AACGACTGAA ACGACTTGGG AGACGACTCT 
    GATGATGATG ACCTCATGTC TTCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18220854 [Map]; Strand: w
      • AT2G44030.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24006 - 5-prime edge 
    CCTGAGTTTA TGACACTACA ACGATGGACA CGCTTGATTA CAATACACCC 
    ATGGACAAGC TTGACTTGTG TCCAAATGTT TGCATGCTAA AGATCGATAA 
    CCAAGACTTC CAAGCATCGG TTTCCGATGG GAAACTCAAA CTAGTTCGCT 
    GTCGTGGCGC TATGGCGTGG CATTGGACGG TTGGGGGACT TGAAGAATTG 
    TCTTGTAATT ATCTTCTTTC GGTGGCAAGC CCTGGCGGAG GAAGGAGAGT 
    GACAGTTTGG TGGAAGACGT ATACTAAGGA ATGTAAAACG GAGATTTGGT 
    GTGCACTAAT TTTGCTTGAG CGCGAGTTGG TTTGGGGAGT CATTGAATGG 
    TCTGAGAATG TGTTTACCTT GCCTGGATCT GAATCCGATT CAGATTCCAA 
    TTCCTTCCTT TTGCATTATG AATTAGTGAC ACTTGCTCGA CACTGAATAT 
    ATACTTTCAC AAGTCTTGCT AATTATATGG ATATATACTA CCAACAAGAC 
    CAGCAGCTTC TTTCCTTAAT GCTTATTGCA GACATTGATG GAGCTTACTT 
    TCCCTCATTT GTTTCTCATG GCCTATGGAA CATAAAACCG TTCTTTGGTG 
    TCTCATGAGA AGCCCATTTA AAGCCCAAAT AAGCTGTCAC TGTTACACAT 
    TTAAA

AT2G44030.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G46050.1); Has 1608 Blast hits to 1542 proteins in 125 species: Archae - 6; Bacteria - 108; Metazoa - 399; Fungi - 9; Plants - 1057; Viruses - 2; Other Eukaryotes - 27 (source: NCBI BLink).
Link
InterPro Scan - TAIR