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GT24025

CSHL Arabidopsis genetrap mutant lines

Original: GT24025

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24025

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 172714 [Map]; Strand: w
      • AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24025 - 5-prime edge
    CCTGTCTTCG GAGAAGCCGG TCGGATTCAA TCCATGTACT CTGTTTTTCA 
    CCTTATGAAG GAGAAGGGTG TGTTGATCGA TACGGTGACT TATACATCGC
    TGATTCACTG GGTTTCAAGC TCCGGTGATG TGGATGGAGC AATGAGGTTG
    TGGGAGGAGA TGAGAGATAA TTGGTGCGAA CCTACCGTTG TGTCGTACAC
    TGCTTACATG AAGATGCTTT TCGCTGATGG GAGGGTGGAA GAAGCCACGG
    AGGTGTATAA GGAGATGTTA CGGTCGCGGG TTTCTCCGAA TTGTCACACT
    TATACTGTAT TGATGGAGTA TCTTGTCGCC ACAGGTCAAC TTCATTCTCT
    TGCACACTAA GTGTTTGTTA AAATGCTTAG CTGAAAATCC AAAACTTTTG
    CTTTATGTAG ATGATTCTGG TATCTGAATG TTTTGTAGCC TTGTTGATGA
    TGATGTGTTA GTTTCTTCGT TTGATTTTGC AGGAAAATGT GAGGAAGCCT
    TGGACATATT CTTTAAAATG CAAGAAATTG GTGTGCAGCC AGATAAAGCA
    GCTTGCAATA TTCTGATAGC GAAAGCCTTG AAATTTGGGG AAACATCTTT
    CATGACTCGA GTTCTTGTGT ACATGAAAGA AAATGGAGTT GTCCTACGCT
    ATCCTATCTT TGTTG

AT2G01390.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G01360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR