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Mutant Lines
GT24042

GT24042

CSHL Arabidopsis genetrap mutant lines

Original: GT24042

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24042

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 5189589 [Map]; Strand: w
- AT3G15360.1 - [+] show detail - thioredoxin M-type 4
  Distance: 0; Region: exon2 (3UTR)
- AT3G15370.1 - [+] show detail - expansin 12
  Distance: -983; Region: promoter

TGTAAAGTCT TTTAAGTTTT TGACTATTAT GTTATCGTAG GGTCCTCTTT 
GTCTTCTTCA ATAAAAAAAA TGGAAACAAA GTAATCCACC GACGCATGAG 
AAGCATAACT CCTCGTTGAA CCACATGCCA TTGTTCTTCC TAATTCACCG 
TACAATCTAT ATACATACAT ATGTTTTGAG TAATGTAGGC TTCCGTACTG 
TTTCATTCTG TGTACTGCAT AGGACATATA TTAATACCAC GAGGGGGTCT 
ATGTAATCTT ATATTATATC ATGTATGTTT TCCATTTCTA AACCAATTAT 
GTGAGAATAT ACTATGTGGC ATGTCCAAGC CATGTCTTTA CTAAACGATC 
AGGAAAAAAC GCGTTTCGTT TTTAAATCAG TTTAGTTGGA TTCCCCTATT 
TAATCTCGAA TTACACAGGT CATTTCGCGA CTAAAACTTA GGAAACTTAA 
ATTTCAAATT CCCAACCTTG GATAGCACCA AAAAATTAAA ATACAAAATC 
CGGAACTAAA TATACGGCTA AATATCCAAA ACGTTTGGCA ACTCTGCCAT 
TCTCTTCCAT CATTTTCCTC TCGGACCCAA ATGTTATTTA GAGTCAAATT 
AAAAGGGATT TCACTCTATA ACCAAAGCTA AAAATATC

AT3G15360.1

Model type: Protein coding
Short Description: thioredoxin M-type 4
Curator Summary: encodes a prokaryotic thioredoxin
Computational Description: thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G15370.1

Model type: Protein coding
Short Description: expansin 12
Curator Summary: member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Computational Description: expansin 12 (EXPA12); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A17 (TAIR:AT4G01630.1); Has 2144 Blast hits to 2141 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 40; Plants - 2066; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link: InterPro Scan - TAIR