1. Home
  2. Mutant Lines
  3. GT24077

GT24077

CSHL Arabidopsis genetrap mutant lines

Original: GT24077

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24077

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7270490 [Map]; Strand: c
      • AT1G20890.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -3167; Region: intergenic
      • AT1G20900.1 - [+] show detail - Predicted AT-hook DNA-binding family protein
        Distance: -2066; Region: intergenic
    Flanking Genome Sequence: GT24077 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGATAAGG TATTGACCAA 
    GTACCGATGA TCCGACCGCC TCCACGTGGT CACACAGCTT GGCTTTCACT 
    TTCATCTCTC TCGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7270392 [Map]; Strand: c
      • AT1G20890.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -3069; Region: intergenic
      • AT1G20900.1 - [+] show detail - Predicted AT-hook DNA-binding family protein
        Distance: -2164; Region: intergenic
    Flanking Genome Sequence: GT24077 - 5-prime edge 
    AGTACTCCTC CCGAATCTAT CTAACTTACT TTCGCGTCTT TTGCCCGTAT 
    TTCTAATGCT TAAAAGCAAA AACGTACGTG AAGTCTTTTG TTTGCGGTAT 
    CTTAATCATA AACTGGTCCA ATTTTTTCTA TCGATCGAAA ACGGAATGTG 
    TGGAACTATC AAGATACTTC GAAAATAAGT GAGATATGTT TTATTTGCCC 
    CCAAAAAAGA AAAGTGAGAG GTGTTTCATG TGATATATAA TTTAATTTTA 
    AGCCATAGAG AGAGAGAACT ACACGTCAAA TTAAGCACGT CATGCAAGTC 
    TATAAATATG TGACTGTACC TAAGTTCTTA TGACGCTGTC GCTACTCGTC 
    TTGATCATGA ACACATTTCT CTCAAATTAA TTAAAGATTA TATATGTATT 
    AATGAATCCA TTAGTCCAGT TACTGTCGCG TGGAATTCGA TGTTAGAGAA 
    CTCATAAGAA AAAACTAAGT TAAGTTCTTG GTATCCATAA AAGTTTATAT 
    ATTTACCAAA CATGGAATAA AAGCAGTTCT AAATTGTTCC GACAAACACG 
    TAAACTGATC AAAACATATT TTTTTCTTTT TTTTTTCC

AT1G20890.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20900.1

Model type
Protein coding
Short Description
Predicted AT-hook DNA-binding family protein
Curator Summary
Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light.
Computational Description
ESCAROLA (ESC); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G76500.1); Has 2335 Blast hits to 2120 proteins in 205 species: Archae - 0; Bacteria - 577; Metazoa - 531; Fungi - 95; Plants - 869; Viruses - 15; Other Eukaryotes - 248 (source: NCBI BLink).
Link
InterPro Scan - TAIR