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GT24084

CSHL Arabidopsis genetrap mutant lines

Original: GT24084

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24084

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 930509 [Map]; Strand: c
      • AT1G03720.1 - [+] show detail - Cysteine proteinases superfamily protein
        Distance: -4136; Region: intergenic
      • AT1G03730.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 319; Region: intergenic
    Flanking Genome Sequence: GT24084 - 5-prime edge 
    TCATGATAGT ATTAAAATTA TGGATATTCA TTATTTTTAT TAATCAATTT 
    GTTCATTTTC CTAAAATTAC TTATCTTTTT GCTTATAATT TACCCTCTCT 
    TTTTTTGTGT CTAGTTGATT ACTTACTTTT TACTTCATCT CACTCGA

AT1G03720.1

Model type
Protein coding
Short Description
Cysteine proteinases superfamily protein
Computational Description
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: ovule, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, papain C-terminal (InterPro:IPR000668); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G17080.1); Has 2156 Blast hits to 2154 proteins in 385 species: Archae - 2; Bacteria - 56; Metazoa - 1002; Fungi - 0; Plants - 537; Viruses - 67; Other Eukaryotes - 492 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G03730.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR