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GT24086

CSHL Arabidopsis genetrap mutant lines

Original: GT24086

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24086

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 919812 [Map]; Strand: c
      • AT5G03620.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT24086 - 3-prime edge
    TACCGACCGT TACCGACCGT TTTCATCCCT ACACGGGACT CACACATCTT 
    CCACAATTGC CGGTGTTTCA GTCTCCAGCG CTAGCCTTTT CGGAATTGCA
    AACGGAACAG CTCGAGGTGG TGTTCCTTCT GCTAGAATAG CTGCATATAA
    GGTTTGTTTT CTTCGTTATA TCATTACTCT GTTTTCTTGG AACATAAGGA
    ATATCTGAGA CACATTATCC TCTGTTTCAA ATTAAGGTGT GCTGGGACTC
    AGGATGTACA GACATGGACA TGTTGGCAGC ATTCGACGAG GCGATTTCTG
    ATGGGGTCGA TATAATATCG ATTTCAATTG GAGGAGCCTC GCTTCCGTTT
    TTCGAAAATC CAATAGCTAT TGGAGCGTTT CACGCGATGA AAAGAGGGAT
    CTTGACAACG TGTTCCGCAG GTAATAACGG TCCTGGTCTC TTTACGGTTT
    CAAACCTCGC GCCGTGGGTA ATGACAGTCG CGGCTAACTC ACTCGACCGG
    AAGTTTGAAA CTGTTGTCAA ACTTGGAAAT GGACTCACCG CATCTGTAAG
    TATTTCTCTT TCAAGAGCTG AAGTATCATC TCAATCTTGC TTGTATGGCA
    AGTACCATAA GATTACAAGA TCTCTTTTGC AGGGAATATC TCTAAACGGA
    TTTAATC
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 919725 [Map]; Strand: c
      • AT5G03620.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT24086 - 5-prime edge
    TCCGTGACCA TCGTGATCTG CTGCAGAGTC TCCCTCGCCA TCAGGAAGGC 
    CTTTTGATTG GATGTGGAAG TACTTTGCTC CAATCACTTT ACTGTTTTAA
    CATTAATCCA AAACCAAATT CAGTAAAAAG AAGAGAGTAG AGAAGTTGCA
    GAAACAGAGG ATTATAAAAA CAGAGGATTT ATACTTATTG CAACGAGTAA
    AGTTATTTCC AGTTACACAT TTTCCTTTCC ATTTAGCTGG AGGAGGGCCA
    ACGCCTTTGT CATTAAAGCT CGGTGATTCA ACATCGATTC CTTTTGACAA
    CAATAAAAAA GGGTTATAAA TCGGGGTTTA TCGATATTTT CAGATTCGAG
    TTCTAACTAG TAAATTTACT TTACCGGGGT CAAGAACTCC CACAATGATG
    TTACTTTCAA TTCCAACACT TCTTTTGTAT TTAGACTCAA CAAGTCCTAA
    AAAGTCCCAG GATCTTGTCG GGGGAAGCTG TCTTTGAGGG TTCTTAAACA
    CCGATACAAC TCCTTCTTCC CCGGCAAAGA AACAATCCAC AAAGAAAAAA
    CAATCAATAA TCAATAACAT CAAGATAAAA GCCAAAACAG TTCGGACAGT
    TTTGTTACTT AC

AT5G03620.1

Model type
Protein coding
Short Description
Subtilisin-like serine endopeptidase family protein
Computational Description
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: xylem serine peptidase 1 (TAIR:AT4G00230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR