1. Home
  2. Mutant Lines
  3. GT24090

GT24090

CSHL Arabidopsis genetrap mutant lines

Original: GT24090

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24090

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 11011214 [Map]; Strand: w
      • AT2G25800.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: -1475; Region: intergenic
      • AT2G25810.1 - [+] show detail - tonoplast intrinsic protein 4;1
        Distance: -1292; Region: intergenic
    Flanking Genome Sequence: GT24090 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TATTCTGCAT GCCGTCGTCT 
    CATACCGCCG TTGTCCTCTC AGACTAATAC TATTGCTTCA ATCTATCAAA 
    TAAAGGCAAA TACCATATAT GCTTATATGT TATCTTACAT AGCCACAATC 
    TCCACAATCT TAGTATTCAC TAGTTACTAT AAAATCTTGA TGCTGAAAAA 
    TTCGTACATT ACCTTCATGA ATATGTGTAA AATGGCCTCT TTTTTTGTCG 
    TTTGTAGCCT TGTAAAACAT AGGAACGGCT CTGCATTTAG ACATGCAGAA 
    TGGACGAGTT ATTCAAAATC AACGAAACTA AACAAAAAAA ACAATGTCAA 
    TTTTTGTTTA ACCTAAACTA AACCGAATCT AATTTTAACC GATAATACCT 
    CTTGATAAAC TTTTACTAAT CAATTAACCT TCCTTGTCTT CTACCTTGAT 
    TTGGGGAAAG TGTTGTCCTA AATTCATGTA AATCATCCGT ACATAGAAAA 
    AAGTTACTTG TAACATAATC TGACCAAACA AAACTAACCA CTTAAATATC 
    CTAAATCTCT CTTTCTAAGC CTATCTAAAT ACTTTGAATT TGTATCATCG 
    TTTGAAACAA TTTAATATAG AAAAGAAAAA GTAAACAAAT CCTAGTTTGT 
    ATTTTTT

AT2G25800.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G20010.2); Has 317 Blast hits to 232 proteins in 40 species: Archae - 0; Bacteria - 8; Metazoa - 29; Fungi - 20; Plants - 175; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G25810.1

Model type
Protein coding
Short Description
tonoplast intrinsic protein 4;1
Computational Description
tonoplast intrinsic protein 4;1 (TIP4;1); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, membrane, central vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: gamma tonoplast intrinsic protein (TAIR:AT2G36830.1); Has 10430 Blast hits to 10407 proteins in 2161 species: Archae - 84; Bacteria - 4945; Metazoa - 1471; Fungi - 406; Plants - 2499; Viruses - 0; Other Eukaryotes - 1025 (source: NCBI BLink).
Link
InterPro Scan - TAIR