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GT24102

CSHL Arabidopsis genetrap mutant lines

Original: GT24102

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24102

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 148930 [Map]; Strand: w
      • AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT24102 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT ACTCTCGGGT GGGTTAATGT 
    TTGGTTGGTG GTGTTGATGA TATTTTCTCG GTGGTGATAC TGATAGACAT 
    GGGAAAAAAA GAACAAAAGC TCTCTTTAAC TATTAGACGT TTGAAATGTG 
    GAGAGAATTT TTGCAAGATA AAATCTGTAA AAGCTGTGAC TTCATACCTC 
    CAAAAAGTAA ATTCATTCAG AAAAAGGTTT TGGAACTATA GTTCCTAACG 
    CCAAAGTTAC TATATTAACC CTCATTCATC AACACCGGCG GGATAGGAAC 
    TAAAAGAAAG AGAAGGGCAG AATAGGAATT GAGAAGAGGG AGGTGGCAGT 
    GGCAGACATA AGTGGCTAGA AGTCAAAGCC ATGACATCTT TTTTCTCTTC 
    TTCTTAAATG ATTCCTAACC TTTTTCTTAA TTATTTCTAA TTAATTACTT 
    TATGCAGCAA ACAAAAGGTG TTAATCAAAG AATCATTTTC TTTTTAATAT 
    CTTACACACG ACAAGACTAG TCGCATGTGG ATCAATTTAC TATTTGGAAT 
    ATTCAGTTTC TCTTTAGACT ATGGAATTAT ACTATATCCA TATCTAATAA 
    AATCTCTCTC TTTCTTTAAC CAAACAAACA AACAAAATCA TGCTTATAAT 
    GATTCCCAAA TC

AT4G00340.1

Model type
Protein coding
Short Description
receptor-like protein kinase 4
Curator Summary
Encodes a receptor-like protein kinase that is expressed in roots.
Computational Description
receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink).
Link
InterPro Scan - TAIR