1. Home
  2. Mutant Lines
  3. GT24126

GT24126

CSHL Arabidopsis genetrap mutant lines

Original: GT24126

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24126

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18796320 [Map]; Strand: c
      • AT2G45630.1 - [+] show detail - D-isomer specific 2-hydroxyacid dehydrogenase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G45630.2 - [+] show detail - D-isomer specific 2-hydroxyacid dehydrogenase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24126 - 5-prime edge 
    GCAGTATCTG CGACATCTTC GGAGAAGCTT GAGCCAGCGT TGGCGACGGA 
    GATGCCTCGA CGACGGCATT CAACTAGGTC AACGTGGTCA ACGCCGGCGC 
    TAGTAGTAAC AACCAAGCGA AGATTAGGGA GGATGCGAAT CAGATCGGCT 
    GTGACCGGAG CAGCTACAGG GGCTATAATG GCGGAGATGG AGTCAGAGTG 
    ATAGGCCAAG AATTCAGGAA GAGGAAGCGG AGACTCGAAG GCTTTGAGGA 
    TCTCGAACTT GGTGGAGGCG ACGAATCCGT CGCCTAACAC AGCCATGGCG 
    TCGGGACGTT TGACGATGAG GACACGTGGC AGTTTCTCGG TGGAAGAGCT 
    CGTCGCCATC GTTGCGACTT GCGAGATTAA TCTGTTTTGC ATTATTATTA 
    AAAAATTGTT TTCAAAACTA TCTCACTTCT TTTTTCAAGT CACGCAAATA 
    ACACGACACG TTTAAAAAAT CCACCCACAT CACCATCATA CAAAAATCTT 
    CAAAACTAAA ACCTTTCTTT TTGTTGGGTC ACAAGCAAGA TTTCAAATCA 
    CAACCAAAAA AGCAAAAAGA ACAAAGCATG AATCTTCTAC CCATAAATAT 
    ATACAAGCCA CACGAATCCG CGATTCAAAT GTTTTAAAAG T

AT2G45630.1

Model type
Protein coding
Short Description
D-isomer specific 2-hydroxyacid dehydrogenase family protein
Computational Description
D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 6623 Blast hits to 6621 proteins in 1548 species: Archae - 250; Bacteria - 4438; Metazoa - 370; Fungi - 171; Plants - 170; Viruses - 0; Other Eukaryotes - 1224 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G45630.2

Model type
Protein coding
Short Description
D-isomer specific 2-hydroxyacid dehydrogenase family protein
Computational Description
D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, binding, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR