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Mutant Lines
GT24130

GT24130

CSHL Arabidopsis genetrap mutant lines

Original: GT24130

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24130

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 16631010 [Map]; Strand: w
- AT4G34900.1 - [+] show detail - xanthine dehydrogenase 2
  Distance: 0; Region: exon2 (CDS)
- AT4G34910.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -523; Region: promoter

TTTTGTTTCC TTTAGATTTA GGATTGACCG GCACAAACCT CGAATGCGGC 
CAAGGTGGTT GTGGGTCTTG CACCGTGATG GTGTCTAGTT ATGACCGAGA 
GTCAAAGACC TGTGTGTGCG TATCTTTTTC TCTCATAGGT TGCATCTGCT 
TTGCTTAAGT TTAGGCCTTC TTATACTGTT CATACCGCAC ACCTATATTG 
CAGGCCTTAT GCTGTCAACA CTTGCCTAGC ACCTCTCTAC TCTGTAAAAG 
GAATGCATGT AATATCCATT GAAGGAGTTG GTCATCGGAA ACTTGGCTTG 
CACCCTCTTC AGGTGGGGTT TACTTCTTCC AGATTTTTTT TTTTTCCTTC 
CCCCCCAACA AATTCCCCCT ATTTCCCCCC GGAAT

5 prime edge [+] show sequence

Chromosome: 4; Position: 16631212 [Map]; Strand: w
- AT4G34900.1 - [+] show detail - xanthine dehydrogenase 2
  Distance: 0; Region: exon1 (CDS)
- AT4G34910.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -321; Region: promoter

TCTATCTAAA CTTAGATTAG ATATAAGCAT TTGAAGAAAT CAATAATATA 
GAGTTAAAAG CACCTCTGAG ATATTCGAGA AGCGTCATGT GAGCTAATCC 
ATCAGGCAAA ACTCTACGAA CACCATTAAC GTACATTATT GCCTCCATGA 
ACTCGTTCTG CTCCATCTTC ACTGAACCCA GACGAATAAC TGTTATCCAA 
TAATGGCAAA TATCCAATAA TGGCAAAAAT CCAATAATTG CAAAATCTTC 
TCTTTTTAAA ATGTTTTTTT TTTTTTTTTT TTTTTTCCAC AAAAAAAAGG 
AAAGCCCAAT TATTAAACCC CAAAAAAAAA ATGGACCCCA AAAAAAACCC 
AAAATTGGAG TCCTCAATCC GGGCGGGGAA ATTGAAAAAA CCCCATAAAA 
GTCTAAAAAA AAAAACCCGG GGGAGGAGGT TTTACAAAAA TTTTCCCTTC 
ATTTTTTCAT TTTTTTCCGG GGCCGTTTTT CAAACCTATT CAACCAAAAA 
AGCTCGGAAA TTTTATATTC CCGGGGGAAA AAAAAATTAA AACCTGGGGA 
GGAGGGGAAC TCCGAAGGGG GGGAAAAAAT TTAAAAACCC AAGAAATTTT 
GGGAACAAAA A

AT4G34900.1

Model type: Protein coding
Short Description: xanthine dehydrogenase 2
Computational Description: xanthine dehydrogenase 2 (XDH2); FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, allantoin biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 1 (TAIR:AT4G34890.1); Has 21587 Blast hits to 20745 proteins in 1345 species: Archae - 453; Bacteria - 12993; Metazoa - 1073; Fungi - 109; Plants - 266; Viruses - 0; Other Eukaryotes - 6693 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G34910.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink).
Link: InterPro Scan - TAIR