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GT24150

CSHL Arabidopsis genetrap mutant lines

Original: GT24150

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24150

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13058572 [Map]; Strand: c
      • AT4G25580.1 - [+] show detail - CAP160 protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT24150 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TAATGATGGT TAGGGAATAA 
    AATGGGAATT ACGGGTTCGG GAGGAGGTGA GGCAGGCCAA CAAGGTTCTA 
    TGCCTTTGCA AAAGAGATTT CAAGAATCTG GAAACTGAGA TTCTGCTTCT 
    TCTTTTTAAA TGTATGGTTT GTTAATCCTT TCTAATGTGC GTTGTGGTTT 
    GATGATCCAT GGCTTATTTT GATGTATCTA CTACTAGTAC CATGTAAAAG 
    TATGAATAAA TTGAGTTAAA TAGTATTGTA ACTTAGTACA ACACAAAAGG 
    AGTAAAAATT ATCGTCGACA GCAGGGTTCG AACCTGCGCG GGCGAAGCCC 
    AACAAATTTC AAGTCTGTCT CCTTAACCAC TCGGACAAAT CGACTTCTTG 
    TTTAACCACA ACAAGATAGG AAATATTATT CGTTTATTTG AAAGTTACAC 
    AACAAAGCTA CAAGGTTTGA ACTTCTCTCC CAAACGGAAG TAAAAAGAAA 
    AGAATGTTTA TAAAATGAAT AAAACATAAA GAATTCAGTT TTCAACCAAA 
    TAACATGGTA ATTTTTTTTG TGAAAATCAG GATCGATGAT AGAGATATAA 
    ATCGTTGAAA AGGAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13058481 [Map]; Strand: c
      • AT4G25580.1 - [+] show detail - CAP160 protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: GT24150 - 5-prime edge 
    TTACACCAAA TTAAAAGTCA TTACCACCGT CAAAAGCCGA AAACGTTGCT 
    TAACAGGAAG AGGCGTGTAT TACCAATGGT GGAGCCAAGT GACTGTGTAG 
    AGTCTTGAAC AGATTCTGTA GACTTTTGCG TCACTTCTTC CGTCGTACCA 
    GCGATCCAAG AAGTAACAGC TCCTCTCAGC TTCTCCGCAA TCCCTCCTTC 
    GCCTTTCTCC GCATATGCTT CACCCTGTTT CGTAGCTGCT TCCGAGCTCG 
    GATCCTTAAA CCCTCCTAAC CTTTTCTCCA CCTCCTCCGA TTGTGTCACT 
    ATCCCTCCCT TCGGTGGCGC AGTTTCGCCA CCGCCTCCTC CAAGATGAAG 
    CTTCTCAGTG ACCACTTCCG ACAAAGCCTT GTCTTCCTCT CCCGGACTCA 
    GTTTCTCCGT AAGGAATTCT TTCGCCGAGA CGCCCCTGTC TTGTCCTTGC 
    TCTGTCCCGG TCCCGGTGAA TGGTAACTTC GTCATTACAC TAGCTCCTGT 
    CTCTTTAACC TTCTCGTAAA CTGGAGTCAC CATACTTGCG ACCGTACTTC 
    CGTATCCACC AGCGGAGCTA GGATTTTCTG CTCCTTCCAC ACGATTCTCG 
    GGGCCGCCTT CCCCGGAGTA ACCTAACTTC A

AT4G25580.1

Model type
Protein coding
Short Description
CAP160 protein
Computational Description
CAP160 protein; CONTAINS InterPro DOMAIN/s: CAP160 (InterPro:IPR012418); BEST Arabidopsis thaliana protein match is: CAP160 protein (TAIR:AT5G52300.1); Has 292 Blast hits to 249 proteins in 85 species: Archae - 0; Bacteria - 26; Metazoa - 66; Fungi - 33; Plants - 116; Viruses - 9; Other Eukaryotes - 42 (source: NCBI BLink).
Link
InterPro Scan - TAIR