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GT24170

CSHL Arabidopsis genetrap mutant lines

Original: GT24170

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24170

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19673592 [Map]; Strand: w
      • AT2G48110.1 - [+] show detail - reduced epidermal fluorescence 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24170 - 5-prime edge 
    TCGCTCAATT CCTCGTCACC CACATCTTCT GGGAAAATCA CTCTCCTCTT 
    TCATGGAAGC TTCTCGAAAA AGCTATATCC GTCAATATTG TCCCTCCCCT 
    ACTTGTCCTC GCCCTTCTCT CCCCAAGGTA ACAATGAGTC GTCCGTCTAC 
    TAATTGCTCT TCTAATGGTT CTCATCATTT ATGCTACTTG TTGAAATATT 
    CCCCTCAAGC TGTCTGTAAT AGGCTCATTG CCGTTGGGTT ATCACTTTTC 
    TTTTTTTATC ACCAGGCTCA TGTACAAAAT CAGTACAGTT TTTAATTCTT 
    TATGGTTTGG TAATTTTAGG GTAATCCCAA ACAAAAAGCT TCATCCCGCA 
    GCCTATAGGC TCTATATGGA ACTCCTCAAG AAACATGCAT TCTCATTCAT 
    GCCTCTAATC AAAGCACCAG GATATCACAA GTGAGTTCCT TATCTCAGTT 
    AAACCTTGTT TTCTCCAAAA AAGTTATTTA TTTTTGGCAG TGTAATAAAA 
    TATTAATGTA AAAGTTTTTA CATGCGTAAT CATAATGCTA ATTTTTCTTC 
    TCCTAGTTTG AAAAATGCAT ACTAATGTTG TTGTTACAAA TGAACAAAAC 
    AATGAATTCC ATCGATGATA TCCTCCATCT TTCTGAAACC TTTGGTGTCC 
    AAAATCAAAA ACC

AT2G48110.1

Model type
Protein coding
Short Description
reduced epidermal fluorescence 4
Curator Summary
Encodes a novel protein of unknown function with homologs in non-seed plants. Sequence analysis predicts membrane spanning domains and a putative protein-protein interaction domain. Semi-dominant mutations display defects in phenylpropanoid accumulation suggesting a role in phenylpropanoid metabolism.
Computational Description
REDUCED EPIDERMAL FLUORESCENCE 4 (REF4); BEST Arabidopsis thaliana protein match is: REF4-related 1 (TAIR:AT3G23590.1); Has 140 Blast hits to 138 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR