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GT24194

CSHL Arabidopsis genetrap mutant lines

Original: GT24194

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24194

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13103684 [Map]; Strand: w
      • AT3G32110.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT24194 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT GGGTCTTGAG GAAACCTACC 
    ACCACCTCCG AATCCACTTC CAGCTCCAAG TGTGTAAGTT GTTTAGCCCA 
    AGCCATATAC AACCCATAAT ACACACCCCA CAGTTCTGCT AGCGGTGCTG 
    AACACCGCCC AATGTTAACC GCAAAGCCTC CACACCATGC ACCCGCACTG 
    TTCCTCAACA CACCTCCGGC TGAAGCTAAC CCCGGGTTCC CACGTGAAGC 
    TCCATCTGTA TTGATCTTGT ACCATCCCTC CATAGGAGGT GTCCAACGTA 
    TCGGTTTGTT CACTCTTAAC CCCGACGGCC TGAGCTCGAC TACCCGCGAG 
    TAAGCTAGCG ACACCTCCGC AGCTAGGTCT TTTATGAAGC GCACCCGATC 
    ACGGCATGTT TTATTCTCCC CAAAAATATT GCTACACCGC CATTTCCAAC 
    CCCACCAAAC CGCCATAGCA AACATCGTCA ACCAGTCACT ACCCTCTGCC 
    ATAATACCTT GCCTTAGATT CGAGTAAAGC CACTCCAATA AGGACATAGT 
    GAAAAACGAC TGCTGCAATC TCCTTGGTAC AATACAATCC CATATGCCCG 
    ACATAGCGGG ACAATCCCTA AGAACATGTA TGATTGATTC TATGCCTCCT 
    CGACAAACTT GACAAACATC AAAATTACAC AAATGCCTTC TCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13103763 [Map]; Strand: w
      • AT3G32110.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT24194 - 5-prime edge 
    CCCTACTCAA GACAGGGATA GGTGAGACTC ATCCCTTGTC TTTCCTGGTA 
    CGTTTGTGCC ACGGCTTTTT ATCAAAGGAC TGGACAGTCC GTATATCTCA 
    CGTATATCGG GAAGCTAATA GTCTTGCAGA CGGTTTAGCT AACCATGCGT 
    TTTCTTTGTC GTTGGGTCTT CATGTTTTTG ATGAAATCCC GATCTCTCTT 
    GTTATGCTTT TGAGCGAGGA TAATGACGGG CCTGCGCGCC TAAAACGAGT 
    TCGTTTGTAA TTTTTCTGTT TTTTTTTTAA AAAATTCCGG GGGTTTTTCC 
    CCGGGGATTC CCCAAAAAAA AAAAAAAAAA GGGGGGGGCC CCCCATTTTT 
    TTTGGGGGGG GGGAAGGGGG GGCCGGGTTT TCCCCCCCAA AAAAATTTTT 
    TCGGAAAAAG AAAAAAAAAG GGGTTGTTTT TTTTTTTTTT CCAAAACAAA 
    ATTTTAGGGG GAAAAAAAGG GTTTCTGCTT TCCCTTTTAA AAAAAAAAAT 
    TTTTTTTAAG GGGGGGGGTT TTTTTCCCCC CCCTCCCTTG TGGAAACCCC 
    CCC

AT3G32110.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.9e-52 P-value blast match to GB:AAA39398 ORF2 (Mus musculus) (LINE-element)
Link
InterPro Scan - TAIR