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GT24197

CSHL Arabidopsis genetrap mutant lines

Original: GT24197

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24197

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2748859 [Map]; Strand: c
      • AT3G09000.1 - [+] show detail - proline-rich family protein
        Distance: 400; Region: intergenic
      • AT3G09010.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -1094; Region: intergenic
    Flanking Genome Sequence: GT24197 - 5-prime edge 
    TTGTCTCTAA ACGTGAAGAC GATTCACCGA ATCCAAATCC TCACAACGAC 
    ATGTTCTTCA AGTATATTTG ACTCTCTTAT AAACCTAACG AGACAAGTTT 
    ATGAATATGT TCCTTTGTTT ACACTTGTAA GAAAACCGAA ACCCATTTAC 
    ATGTCTCTGT TTCGTCCCTT CATATAGTAT AAAAGATTCA AATATATATC 
    TGGAGATTCT TATCGTACAA CTTTTTTTTT TGTATCAGTC ATATTGGAAT 
    GAACCATTTT GGTACATGCC AAAAGCTGGG AATTTTCAAG TAATTTAAGG 
    GATTTACAAA AAGGGTTGTC CCGCGAGATT TAGGTACCAA AATCGTTAAA 
    TTCTTCTTCT AGGCCCGGTT TTGTCTTCTT TACAATTTCC AGGTTTTGTT 
    CTGTTTCCCG ATTCCCACTT TGTTCAAAAT CTGGGTTTAA AAAATCAAAC 
    ACAGCATTTA GCAATTGTTT TGGGAAAACT TTTTTGAAGG AAAAAAAACT 
    TTTGATGCCG GAGGTTTAAA AATTAAACGG TTGATCACTT AAAAACAAGT 
    TGTTTCAAAG CGGGGGAACA AAAAACA

AT3G09000.1

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 72642 Blast hits to 41597 proteins in 1862 species: Archae - 219; Bacteria - 10073; Metazoa - 26321; Fungi - 16532; Plants - 3439; Viruses - 1862; Other Eukaryotes - 14196 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09010.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G16670.1); Has 118495 Blast hits to 117144 proteins in 4669 species: Archae - 109; Bacteria - 13491; Metazoa - 44039; Fungi - 9996; Plants - 33355; Viruses - 385; Other Eukaryotes - 17120 (source: NCBI BLink).
Link
InterPro Scan - TAIR