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GT24199

CSHL Arabidopsis genetrap mutant lines

Original: GT24199

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24199

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13899327 [Map]; Strand: w
      • AT5G35732.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 940; Region: intergenic
      • AT5G35735.1 - [+] show detail - Auxin-responsive family protein
        Distance: 1425; Region: intergenic
    Flanking Genome Sequence: GT24199 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT AACTAAGAGA GGGCAACAAA 
    AGTTGACAGG GGACAAATAC TGAGAGTGTG ACTACCATCC ACTAAGGTAA 
    GAAAAAGACA AATATTCGTT AAAAACTTGG CAAACTATTC TGTCATTGGT 
    AGAACGGAAT CTAAAATGCC TTTTAAGATC TTAGTTTATC AATCTAAAAT 
    TTCTTTTTAC CATGTTCTTT TATATTTCAT CTTATAATCG TATAAAGAGT 
    AGGTTAGGGC ATTCGGATTT CGGATCGTAT TTGGTTCGGA TTTTTTTTGG 
    ATTCGGATAA TTCGGATGAA GGAGTTTATT ATCCGTTCAA ATTATATGAT 
    TATTCGGTTC GGTTTCGGTT CAAATGGTGT CGGATTCGGA TCTGTTTCAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 3442 [Map]; Strand: w
    Flanking Genome Sequence: GT24199 - 5-prime edge 
    TCTCCCTGGC TGTGTTTCGT ACCTAATTTG AAGGAATTGT TGAGTTTGGT 
    TTACACCTTT GCCCGCGGCT TCTCCTTCGT GGGGAAGTCG TGGGCACAAA 
    CATCGGCGCT TGTTCACCTC TCGTCATCGC ATTTGTTGCC TTGCTCGCAT 
    TGGTGAATGA GTTGCGGGTT GAAATCTCGG ATGCGGAAAA GTTGTCGACG 
    GTGACTCGAA GTGATTCAGT CCCGCCAAAG CTCATCCGTC CTTCGGGCAA 
    AAGATGACGG TCAAGACCTC GTCCTTTCTC TCTTTCCATT GCGTCTGAGA 
    GGATGTGGCG GGGAATTGCC GTGATCGATG AATGCTACCT GGTTGATCCT 
    GCCAGTAGTC ATATGCTTGT CTCAAAGATT AAGCCATGCA TGTGTAAGTA 
    TGAACGAATT CAGACTGTGA AACTGCGAAT GGCTCATTAA ATCAGTTATA 
    GTTTGTTTGA TGGTAACTAC TACTCGGATA ACCGTAGTAA TTCTAGAGCT 
    AATACGTGCA ACAAACCCCG ACTTATGGAA GGGACGCATT TATTAGATAA 
    AAGGTCGACG CGGGCTCTGC CCGTTGCTCT GATGATT

AT2G01010.1

Model type
Ribosomal RNA
Short Description
rRNA
Computational Description
18SrRNA
Link
InterPro Scan - TAIR

AT5G35732.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G35735.1

Model type
Protein coding
Short Description
Auxin-responsive family protein
Computational Description
Auxin-responsive family protein; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT5G47530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR