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GT24206

CSHL Arabidopsis genetrap mutant lines

Original: GT24206

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24206

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10319727 [Map]; Strand: c
      • AT5G28350.1 - [+] show detail - Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotid...
        Distance: -412; Region: promoter
      • AT5G28350.2 - [+] show detail - Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotid...
        Distance: -478; Region: promoter
    Flanking Genome Sequence: GT24206 - 5-prime edge
    CTCACTTATT TTTTATACAG AGCCTAGAAC TCCCTCTTTA AATTATACAT 
    AGGCCTATTG GGCATAAGCC GAAAGACGTC TCGCGCCCAG TACACGCCGA
    ATACTTTTAT TTATAAAGCC GAGCACAGTT TCGCACTTAA CATCTAACCC
    GAACTTAAAC AGAAAAAATC GGCTGTGACG TCAGGTGAAA ACCAGTCCGC
    CCGAAAGCCG AGCTCAAAGC TTGCATATGG CTTATAATCT AGTCGATTTA
    AAACCTAATT TCAAGATTGG GAATCCGATA TTGTTAATAC GTAATCAACC
    GACGGAGGTT CACAAAAAAA AAAAAAAAAA AAAAAAAGGT TTTTTTTTGG
    GGGAAAAAAT TTTTTTTTTT TTAAAAAAAG TGGGAAAAAA AGGGGGGGGG
    GGAATATACT CCCCCCCCGG GCCCCCCCCT TCCCCCCCGG GGGGGGGGGT
    TTTTTCCCCC CCC

AT5G28350.1

Model type
Protein coding
Short Description
Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor
Computational Description
Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosome control protein 1 (InterPro:IPR009771), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor (TAIR:AT3G61480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G28350.2

Model type
Protein coding
Short Description
Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor
Computational Description
Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosome control protein 1 (InterPro:IPR009771), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor (TAIR:AT3G61480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR