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GT24233

CSHL Arabidopsis genetrap mutant lines

Original: GT24233

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24233

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4622860 [Map]; Strand: c
      • AT1G13480.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT24233 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACTCCCAT CCATTCTCGT 
    CAATTCAAAG CTCTCTATCA ATACATAACA TCGATAACTC TTCCAATGCG 
    ATGAACCGCC TTCAAATCTC TCTGATCTCT TAATGTTAGA TCTTTCGCCT 
    GCTTCGTTTA ACCATCCAAA CCTTTCCTCT TCCCATTTCA TCTCACTCGA 
    CAACACATAC CCGAGATCTC TTCTTGTGTT CTTTTTCTTC TCCTATAACA 
    CTAAAAAACA AAACACCCCC TCCTCAGACC CCTCTCACAA AATATTTTTG 
    TGCCCCTCAC TTCTCCCATA CTCTTTTTCC ACCTCCACCT CCTCCAACCT 
    CTCAAAGTGC TTTTTGCCTG TTTTTTCACA AAAAAACTCC TTCTCCCCTT 
    TTTTGAGAAG TGTCGCTGTG AAAAACCGAT ATGTGCTCCT CAGATCTTTT 
    ACCTCCCCCC CCCACAAAAA TAAAAAAAAA ATATAATTTT TCTATATCTA 
    AATACTTTTA TATAAAATAA AAATTTCAGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4622779 [Map]; Strand: c
      • AT1G13480.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: GT24233 - 5-prime edge 
    TGGATGGGAG TTTGGTGTTC ACATATGAGT TTAGGCATGT TGATAAGCTA 
    AAGACCAAGT GGGATTGATT TTCATTCTGT TTTCAGTTTC GTTGTGTGCC 
    ATCTTTTTGT TCAATAATCA ATTTGGTGAA TAAGTTTTTA TGCAAGTTCA 
    TGTAATACTA AACTTTAAGT TCACATTTAA TTTCATGTAA ATGTCAATTT 
    AGTTGATCGA TCTTCTTAAA TGTTTTAACT ATTTCCTAGG TTATCATTTT 
    CAATATTAGC ACATGTTGTA ATCATAATTC CAACAACTTT TGTAAACCCT 
    CCATTTTTAT ATAATTTTAA CTTGTACAAA AAACAAACAA AATCTTCCTT 
    GAAAATTGCT GATAACGTGT TGTGATTCTA TACAAATTTA AAAGTTTTCA 
    CATACGAGTT TAAACAAGTT TCTAAGTTGA AGAGAAAGTG AGATTGAGAT 
    CTTATCCAAC TTTCAATTGT TTAGGGAAAC CACTTTTAAA AAATCTTTAA 
    TCTGTAAAAA TGAGTTTTTA AAAAACAAAA ACCATAAACC ATAACAAAAA 
    TATGGTAAAC CTTCAAGGTC TTAAATTTTT TG

AT1G13480.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13520.1); Has 111 Blast hits to 104 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR