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GT24241

CSHL Arabidopsis genetrap mutant lines

Original: GT24241

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24241

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 102724 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: intron7 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: GT24241 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACCAGTGA CTGCCAGTTT 
    CATCTCATCC ATCAACAATC CCAACACACA AAAGAGAGAT ACACAGAAAG
    AGAGAAGGGG ACTTACGGTG AGGGCCATAC AAAATGATAT GAGAGCAGAG
    AGCCAAACCG CATTAATGGG GACCTCTCTG CTGTTCACTT TGTGCCATAA
    CGGCGACATT GGCATCGCTC CATCTCTCGA AAACGCATAC GCCATCCTTA
    TTAACCAAAC ACACATATGA TCAAGTCCTA AATGCAGACA GAATATGTTT
    TAACCAAACA TGAATGTATA TATATACCTG GAATTGCTGG TGACAGAGCT
    CATGCCACAG AAAAACACAG CAACCGCAAC AACGCCTAAG CACACGATTC
    CACCAGTACC GCTCCCAAAC CTATTCTTGA AAGCTAAGTA GAAGATCTCA
    GCAATGGCAT ACCCACCAGA GTTGTTGGTC TCACTCAGAA AAGAAGGTAT
    GTCTGTGACG GCATAGCTTA TGCCCAATAT ATAACCCCAT CCAAACAGAA
    TTGATATACC AATTGCACTG ATTATTCCTC TGGGCCCGTT CATCTCA
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 102635 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon8 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: GT24241 - 5-prime edge
    GGGGAGCATA GTGGGCGTTC CAAGCAATGG TGTCGATCGC AACGATTGGA 
    CTGTACATAG CATACGCAAT CCCGATTATA TTGAGAGTGA CGCTTGCGCG
    CAACACCTTC GTACCTGGAC CATTCAGCCT GGGAAAATAC GGAATGGTAG
    TCGGGTGGGT GGCAGTCCTG TGGGTTGTAA CCATATCAGT CCTCTTCTCC
    TTACCCGTGG CATATCCCAT AACAGCAGAG ACACTCAACT ACACTCCGGT
    GGCAGTTGCT GGTTTGGTGG CCATAACCCT CTCATATTGG CTTTTCAGTG
    CCCGCCACTG GTTTACGGGT CCCATCTCCA ACATTCTTAG CTGAAACAAC
    GTTTCAGGGG TTGATTTATA GTAAAGCCAT TGTTAGCTAG CTGATATTTA
    CCCTTTTATA CATTCAACAA GCAACAACAC ATCTGTCACA TTTTTATTTC
    ATCGCCAAAA CTTTAAACTT TAAAGCGAAT GGAATAATAA TCAACACAAA
    GTGTTGGCAT GGGCCTCGAC AAAGCCCATT TAAGGAAACT ACGTGACGAG
    TTAAAAAAAA AAAAATATTC CTAAAAAGGG GGGGCCAAAC CCCC

AT2G01170.1

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 15465 Blast hits to 15422 proteins in 1894 species: Archae - 296; Bacteria - 11987; Metazoa - 438; Fungi - 2169; Plants - 254; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01170.2

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR