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Mutant Lines
GT24254

GT24254

CSHL Arabidopsis genetrap mutant lines

Original: GT24254

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24254

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 8210826 [Map]; Strand: w
- AT1G23160.1 - [+] show detail - Auxin-responsive GH3 family protein
  Distance: 0; Region: exon4 (CDS)

TACCGACCGT TACCGACCGT TTTCATCCCT ACTAGTTATA AACCTAAACT 
GAGGTGCTTT GTTATGGAAA CCAGTCACCA CTAGAATGTC TCCAACTCTT 
ATTCTATACA AGCCTGAAGC AAGAAAGAGC ATGAAAAAAC ATTCACATCC 
ACAACAACAA AGAAAAGGAT TAATTAATTT CATGGTTTTT AATATTCATA 
ATGTTTTATT ATTTACCTCA CCTGAAAAAT TTGTGACGAC AGCCTCATAA 
CAACATCCAA GTTTGACATC AGCAAGGTCA ACAACATCGT TCATCCCACT 
CGACA

5 prime edge [+] show sequence

Chromosome: 1; Position: 8161377 [Map]; Strand: c
- AT1G23030.1 - [+] show detail - ARM repeat superfamily protein
  Distance: 2300; Region: intergenic
- AT1G23037.1 - [+] show detail - F-box associated ubiquitination effector family protein
  Distance: -1037; Region: intergenic

TTCAGCTTGA TAATATTTAG AAAAAATAGA TTCATTCATC AGCTATTCTC 
CTAAACTTGG CTTTAAGAAT CTAGCCAAGC ATATTTATCC ACAACAAATG 
GTTTTGCACT TTTTTTTTAT TATTTTTTTT GGGGGTATAT GTGACAGCAT 
AAATTTTATA TCTTAAAAAT TGAGATCATC ATAGGAAAAA AGTTCGAGTG 
AAAAGGAGGA ATAAAAAGGT ATAGGAACCA TGAAGGAAAG GAAAAAAAAA 
ATTAGGATTA TATGTTAAAA AATGCTTCTT TTTAAAAAAA ATTTTGCTCA 
AGTATTTGAG CAGTTTTTGG GAAAAATTTG GGAAGTTTTT GGGGGAAAAG 
GGATTCCACA TTTCCCCTTT GCTATTAAAG GGGTAGCATT TAAAAAGGGT 
TATGAAAAAG TTAAAAATCC CCCAAAATCA TCTTTAAAAG CATTTGCAAA 
ATCTAAACTA TCAAAAGGGG CTATTAAGGC ACCCTTTTTG GAGGGAAGGT 
TTTGCATGCT TGGGAGCAGG GTTGGGGTTT TCATGAAAAG CCCTAATGAA 
AAACTTTCTA TCCATTTTCT CTTATCTATT CCCAAGTTAT CTTT

AT1G23030.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71020.1); Has 7493 Blast hits to 5002 proteins in 288 species: Archae - 0; Bacteria - 26; Metazoa - 2087; Fungi - 726; Plants - 3867; Viruses - 3; Other Eukaryotes - 784 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23037.1

Model type: Protein coding
Short Description: F-box associated ubiquitination effector family protein
Computational Description: F-box associated ubiquitination effector family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 3 (InterPro:IPR013187); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G52320.1); Has 71 Blast hits to 69 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23160.1

Model type: Protein coding
Short Description: Auxin-responsive GH3 family protein
Computational Description: Auxin-responsive GH3 family protein; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT5G13320.1); Has 1394 Blast hits to 1308 proteins in 220 species: Archae - 0; Bacteria - 431; Metazoa - 54; Fungi - 2; Plants - 672; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink).
Link: InterPro Scan - TAIR